ENST00000360565.8 SCAF1

Information
Transcript ID
ENST00000360565.8
Genome
hg38
Position
chr19:49,642,209-49,658,642
Strand
+
CDS length
3,939
Amino acid length
1,313
Gene symbol
SCAF1
Gene type
protein-coding
Gene description
SR-related CTD associated factor 1
Gene Entrez Gene ID
58506
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 49,642,209 49,642,242
2 49,645,021 49,645,134
3 49,645,354 49,645,411
4 49,646,108 49,646,202
5 49,646,526 49,646,626
6 49,646,715 49,646,830
7 49,650,868 49,653,705
8 49,654,349 49,654,431
9 49,654,652 49,654,870
10 49,657,761 49,657,889
11 49,658,208 49,658,642
CDS
Exon number Type Start Stop
2 CDS 49,645,027 49,645,134
3 CDS 49,645,354 49,645,411
4 CDS 49,646,108 49,646,202
5 CDS 49,646,526 49,646,626
6 CDS 49,646,715 49,646,830
7 CDS 49,650,868 49,653,705
8 CDS 49,654,349 49,654,431
9 CDS 49,654,652 49,654,870
10 CDS 49,657,761 49,657,889
11 CDS 49,658,208 49,658,399
Other genome
Genome Chromosome Start End Links
hg19 chr19 50,145,466 50,161,899 Link
CDS sequence
ATGGAGGAAGAAGATGAGTCTCGAGGGAAGACAGAGGAGTCGGGGGAGGATCGGGGCGATGGTCCGCCAGACAGAGACCCCACGCTTTCTCCTTCTGCCTTTATCCTGCGAGCCATCCAGCAGGCTGTGGGAAGCTCCCTGCAGGGGGACCTGCCCAATGATAAAGATGGCTCTCGGTGTCATGGCCTTCGATGGCGGCGCTGCCGGAGTCCACGGTCAGAGCCCCGTTCCCAGGAATCAGGGGGCACTGACACGGCTACTGTGTTGGACATGGCCACGGACAGCTTCCTCGCAGGGCTGGTGAGTGTCCTGGATCCCCCGGATACCTGGGTTCCCAGCCGCCTGGACCTGCGGCCTGGCGAAAGTGAGGACATGCTGGAGCTGGTGGCTGAGGTCCGAATCGGGGACAGAGATCCCATCCCTCTGCCTGTGCCCAGCCTGCTGCCCCGTCTCAGGGCCTGGAGGACGGGCAAAACGGTTTCTCCACAGTCGAACTCCTCTAGGCCCACCTGTGCCCGTCACCTCACCTTGGGCACGGGAGACGGGGGCCCTGCCCCACCCCCTGCCCCCTCCTCTGCATCCTCCTCCCCTTCCCCTTCTCCCTCATCTTCCTCCCCTTCCCCTCCCCCACCCCCACCGCCCCCTGCACCCCCAGCCCCACCTGCCCCCCGATTCGATATCTATGACCCCTTCCACCCCACCGACGAGGCCTACTCTCCACCGCCTGCTCCGGAGCAAAAGTACGACCCTTTTGAGCCCACCGGCTCCAACCCCAGCTCATCAGCGGGGACCCCCTCACCTGAGGAGGAAGAGGAGGAGGAAGAGGAAGAAGAAGAGGAAGAGGAAGACGAGGAGGAGGAGGAAGGCCTGTCCCAGAGCATCAGCCGCATCTCGGAGACCCTGGCGGGCATCTACGATGACAACAGCCTGAGCCAGGACTTCCCAGGTGACGAGAGCCCCCGCCCGGACGCGCAGCCCACACAGCCGACTCCCGCCCCTGGAACGCCGCCCCAGGTGGACTCCACCCGGGCTGATGGAGCCATGCGCCGGCGGGTCTTCGTGGTGGGGACCGAGGCAGAGGCTTGTCGGGAAGGCAAGGTCTCGGTGGAGGTGGTGACCGCTGGTGGAGCCGCCCTCCCGCCGCCCCTGCTGCCGCCCGGCGACTCGGAGATCGAGGAAGGGGAGATCGTCCAGCCGGAGGAGGAGCCCAGGCTGGCGCTGTCCCTCTTCCGCCCCGGCGGCCGGGCCGCCCGGCCTACACCGGCCGCCTCGGCCACCCCCACGGCCCAGCCCCTTCCTCAGCCTCCCGCTCCGCGGGCCCCCGAGGGGGACGACTTCTTGTCCCTGCATGCGGAGTCGGACGGCGAGGGCGCCCTGCAGGTGGACCTAGGGGAGCCGGCTCCCGCGCCGCCCGCCGCCGACTCGCGCTGGGGCGGCCTGGACCTGCGCCGCAAGATCCTGACCCAACGGCGGGAGCGCTACCGCCAGCGCTCGCCCTCCCCGGCGCCCGCGCCCGCCCCGGCCGCCGCTGCTGGTCCGCCCACGCGCAAGAAGTCCAGGCGGGAACGCAAGCGCAGCGGCGAGGCCAAGGAGGCCGCCTCGTCCTCGTCGGGCACCCAGCCAGCGCCGCCCGCCCCGGCCTCGCCCTGGGACTCCAAGAAGCACCGCTCGCGGGACCGCAAGCCCGGCTCCCACGCCTCGTCGTCCGCCCGCCGCCGCTCCCGCTCCCGCTCCCGCTCCCGCTCCACCCGCCGCCGCTCGCGCAGCACCGACCGCCGCCGCGGGGGCAGCCGCAGGTCGCGGTCCCGGGAGAAGCGGCGACGGCGGCGGCGCTCCGCCTCCCCGCCCCCGGCCACTTCCTCATCGTCGTCCTCGAGGCGCGAGCGGCACCGCGGGAAACACCGGGACGGTGGCGGCAGCAAGAAGAAGAAGAAGCGGTCGCGGTCCCGGGGTGAGAAGCGGTCTGGGGATGGCAGCGAGAAGGCCCCGGCGCCCGCCCCGCCGCCCTCTGGCTCCACCTCGTGTGGTGACCGCGACAGCCGCCGCCGGGGGGCCGTGCCACCCTCCATCCAGGACCTCACGGACCACGACCTCTTCGCCATCAAGCGGACCATCACGGTGGGCCGGCTTGACAAGTCCGACCCCCGAGGACCCTCTCCTGCTCCGGCCTCCTCACCTAAGCGGGAGGTCCTGTACGACTCCGAGGGACTGAGCGGCGAGGAGCGGGGCGGCAAGAGCAGCCAGAAGGATCGGCGCCGCTCGGGGGCCGCCTCCTCCTCCTCCTCTTCCCGGGAGAAGGGGTCTCGTCGGAAGGCGCTGGACGGGGGTGACCGGGATCGGGACAGGGACAGAGATAGGGACAGGGACAGGTCATCCAAGAAGGCCCGGCCCCCCAAGGAGTCGGCGCCTTCCTCAGGGCCCCCGCCAAAGCCACCAGTCAGCAGCGGCTCAGGCTCTTCATCCTCGTCGTCCTCCTGTTCTTCCCGGAAGGTGAAGCTGCAGTCCAAGGTGGCGGTGCTGATCCGCGAGGGTGTCAGCAGCACCACCCCGGCCAAGGATGCCGCGTCAGCCGGCCTGGGCTCCATTGGCGTCAAATTCAGCCGTGACCGCGAGAGTCGCTCCCCCTTCCTCAAACCTGACGAGCGGGCCCCCACTGAGATGGCCAAAGCAGCTCCGGGCAGCACCAAGCCCAAAAAGACCAAGGTCAAGGCCAAGGCAGGGGCCAAGAAAACCAAGGGGACCAAGGGAAAGACCAAGCCATCCAAGACCAGGAAAAAGGTCCGCAGTGGAGGTGGCAGCGGGGGCAGTGGTGGCCAGGTGTCGCTGAAGAAGTCCAAGGCGGATAGCTGCAGCCAGGCGGCAGGCACCAAGGGGGCGGAGGAGACTTCCTGGTCCGGGGAGGAGCGGGCAGCCAAGGTTCCTAGCACCCCGCCCCCCAAGGCAGCCCCACCACCCCCTGCCCTCACTCCGGACTCGCAGACCGTGGACAGCAGCTGCAAGACACCTGAGGTCTCCTTCCTGCCCGAGGAGGCCACTGAGGAGGCTGGGGTCCGAGGTGGGGCGGAGGAGGAGGAGGAGGAAGAAGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGCAGCAGCCTGCTACCACCACGGCCACCAGCACTGCTGCAGCCGCCCCAAGCACTGCCCCCAGCGCGGGGTCCACAGCCGGTGACTCGGGGGCGGAGGACGGGCCAGCTTCCCGTGTCTCCCAGCTGCCCACGTTGCCCCCGCCCATGCCCTGGAATCTGCCAGCTGGTGTGGACTGCACCACCAGCGGCGTCCTGGCCTTGACTGCACTTCTCTTCAAGATGGAAGAAGCCAACCTGGCGAGCCGAGCGAAGGCCCAGGAGCTGATCCAGGCCACCAACCAGATCCTCAGCCACAGAAAGCCACCCTCAAGTCTGGGGATGACCCCAGCTCCTGTGCCCACCTCTTTGGGTCTGCCCCCTGGCCCCTCCAGCTACCTGCTTCCTGGCAGCCTCCCTCTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACCGGGCTGGCTGCCACGTCTGACAAGAGAGAGGGCAGCAGCAGCTCTGAGGGCCGTGGGGACACAGATAAGTATCTGAAGAAGCTGCACACGCAGGAGCGGGCGGTGGAGGAGGTGAAGCTGGCCATCAAGCCATACTATCAGAAGAAGGACATCACCAAGGAGGAGTACAAGGACATCCTGAGGAAGGCCGTCCACAAGATCTGCCACAGCAAAAGTGGGGAAATCAACCCAGTGAAGGTGAGCAACCTGGTGCGGGCCTACGTCCAGCGCTACCGCTACTTCCGCAAGCACGGTCGCAAGCCAGGGGACCCCCCAGGGCCCCCACGGCCGCCCAAGGAGCCAGGGCCCCCAGACAAGGGTGGCCCGGGCCTGCCCCTGCCCCCTCTCTGA
Amino sequence
MEEEDESRGKTEESGEDRGDGPPDRDPTLSPSAFILRAIQQAVGSSLQGDLPNDKDGSRCHGLRWRRCRSPRSEPRSQESGGTDTATVLDMATDSFLAGLVSVLDPPDTWVPSRLDLRPGESEDMLELVAEVRIGDRDPIPLPVPSLLPRLRAWRTGKTVSPQSNSSRPTCARHLTLGTGDGGPAPPPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYSPPPAPEQKYDPFEPTGSNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQSISRISETLAGIYDDNSLSQDFPGDESPRPDAQPTQPTPAPGTPPQVDSTRADGAMRRRVFVVGTEAEACREGKVSVEVVTAGGAALPPPLLPPGDSEIEEGEIVQPEEEPRLALSLFRPGGRAARPTPAASATPTAQPLPQPPAPRAPEGDDFLSLHAESDGEGALQVDLGEPAPAPPAADSRWGGLDLRRKILTQRRERYRQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKAPAPAPPPSGSTSCGDRDSRRRGAVPPSIQDLTDHDLFAIKRTITVGRLDKSDPRGPSPAPASSPKREVLYDSEGLSGEERGGKSSQKDRRRSGAASSSSSSREKGSRRKALDGGDRDRDRDRDRDRDRSSKKARPPKESAPSSGPPPKPPVSSGSGSSSSSSSCSSRKVKLQSKVAVLIREGVSSTTPAKDAASAGLGSIGVKFSRDRESRSPFLKPDERAPTEMAKAAPGSTKPKKTKVKAKAGAKKTKGTKGKTKPSKTRKKVRSGGGSGGSGGQVSLKKSKADSCSQAAGTKGAEETSWSGEERAAKVPSTPPPKAAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGGAEEEEEEEEEEEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVSQLPTLPPPMPWNLPAGVDCTTSGVLALTALLFKMEEANLASRAKAQELIQATNQILSHRKPPSSLGMTPAPVPTSLGLPPGPSSYLLPGSLPLGGCGSTPPTPTGLAATSDKREGSSSSEGRGDTDKYLKKLHTQERAVEEVKLAIKPYYQKKDITKEEYKDILRKAVHKICHSKSGEINPVKVSNLVRAYVQRYRYFRKHGRKPGDPPGPPRPPKEPGPPDKGGPGLPLPPL*