ENST00000576479.4 SPON1

Information
Transcript ID
ENST00000576479.4
Genome
hg38
Position
chr11:13,962,723-14,268,133
Strand
+
CDS length
2,424
Amino acid length
808
Gene symbol
SPON1
Gene type
protein-coding
Gene description
spondin 1
Gene Entrez Gene ID
10418
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 13,962,723 13,963,142
2 13,982,847 13,982,953
3 14,041,521 14,041,654
4 14,075,345 14,075,418
5 14,079,899 14,080,021
6 14,135,420 14,135,568
7 14,243,332 14,243,396
8 14,254,528 14,254,729
9 14,255,647 14,255,787
10 14,256,617 14,256,692
11 14,257,716 14,257,898
12 14,259,280 14,259,450
13 14,259,534 14,259,701
14 14,260,588 14,260,752
15 14,262,712 14,262,975
16 14,265,524 14,268,133
CDS
Exon number Type Start Stop
1 CDS 13,962,905 13,963,142
2 CDS 13,982,847 13,982,953
3 CDS 14,041,521 14,041,654
4 CDS 14,075,345 14,075,418
5 CDS 14,079,899 14,080,021
6 CDS 14,135,420 14,135,568
7 CDS 14,243,332 14,243,396
8 CDS 14,254,528 14,254,729
9 CDS 14,255,647 14,255,787
10 CDS 14,256,617 14,256,692
11 CDS 14,257,716 14,257,898
12 CDS 14,259,280 14,259,450
13 CDS 14,259,534 14,259,701
14 CDS 14,260,588 14,260,752
15 CDS 14,262,712 14,262,975
16 CDS 14,265,524 14,265,687
Other genome
Genome Chromosome Start End Links
hg19 chr11 13,984,270 14,289,679 Link
CDS sequence
ATGAGGCTGTCCCCGGCGCCCCTGAAGCTGAGCCGGACTCCGGCACTGCTGGCCCTGGCGCTGCCCCTGGCCGCGGCGCTGGCCTTCTCCGACGAGACCCTGGACAAAGTGCCCAAGTCAGAGGGCTACTGCAGCCGTATCCTGCGCGCCCAGGGCACGCGGCGCGAGGGCTACACCGAGTTCAGCCTCCGCGTGGAGGGCGACCCCGACTTCTACAAGCCGGGAACCAGCTACCGCGTAACACTTTCAGCTGCTCCTCCCTCCTACTTCAGAGGATTCACATTAATTGCCCTCAGAGAGAACAGAGAGGGTGATAAGGAAGAAGACCATGCTGGGACCTTCCAGATCATAGACGAAGAAGAAACTCAGTTTATGAGCAATTGCCCTGTTGCAGTCACTGAAAGCACTCCACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGCGTGATTCTGAAGGCCAGCATCGTACAAAAACGCATTATTTATTTTCAAGATGAGGGCTCTCTGACCAAGAAACTTTGTGAACAAGATTCCACATTTGATGGGGTGACTGACAAACCCATCTTAGACTGCTGTGCCTGCGGAACTGCCAAGTACAGACTCACATTTTATGGGAATTGGTCCGAGAAGACACACCCAAAGGATTACCCTCGTCGGGCCAACCACTGGTCTGCGATCATCGGAGGATCCCACTCCAAGAATTATGTACTGTGGGAATATGGAGGATATGCCAGCGAAGGCGTCAAACAAGTTGCAGAATTGGGCTCACCCGTGAAAATGGAGGAAGAAATTCGACAACAGAGTGATGAGGTCCTCACCGTCATCAAAGCCAAAGCCCAATGGCCAGCCTGGCAGCCTCTCAACGTGAGAGCAGCACCTTCAGCTGAATTTTCCGTGGACAGAACGCGCCATTTAATGTCCTTCCTGACCATGATGGGCCCTAGTCCCGACTGGAACGTAGGCTTATCTGCAGAAGATCTGTGCACCAAGGAATGTGGCTGGGTCCAGAAGGTGGTGCAAGACCTGATTCCCTGGGACGCTGGCACCGACAGCGGGGTGACCTATGAGTCACCCAACAAACCCACCATTCCCCAGGAGAAAATCCGGCCCCTGACCAGCCTGGACCATCCTCAGAGTCCTTTCTATGACCCAGAGGGTGGGTCCATCACTCAAGTAGCCAGAGTTGTCATCGAGAGAATCGCACGGAAGGGTGAACAATGCAATATTGTACCTGACAATGTCGATGATATTGTAGCTGACCTGGCTCCAGAAGAGAAAGATGAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCAAGAGGATGCGACAGCGCATGCTGAAAGCACAGCTGGACCTCAGCGTCCCCTGCCCTGACACCCAGGACTTCCAGCCCTGCATGGGCCCTGGCTGCAGTGACGAAGACGGCTCCACCTGCACCATGTCCGAGTGGATCACCTGGTCGCCCTGCAGCATCTCCTGCGGCATGGGCATGAGGTCCCGGGAGAGGTATGTGAAGCAGTTCCCGGAGGACGGCTCCGTGTGCACGCTGCCCACTGAGGAAACGGAGAAGTGCACGGTCAACGAGGAGTGCTCTCCCAGCAGCTGCCTGATGACCGAGTGGGGCGAGTGGGACGAGTGCAGCGCCACCTGCGGCATGGGCATGAAGAAGCGGCACCGCATGATCAAGATGAACCCCGCAGATGGCTCCATGTGCAAAGCCGAGACATCACAGGCAGAGAAGTGCATGATGCCAGAGTGCCACACCATCCCATGCTTGCTGTCCCCATGGTCCGAGTGGAGTGACTGCAGCGTGACCTGCGGGAAGGGCATGCGAACCCGACAGCGGATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGGTGGAGAAGTGCATGCTCCCTGAATGCCCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCATGTGGGAAAGGCCACGTGATTCGAACCCGGATGATCCAAATGGAGCCTCAGTTTGGAGGTGCACCCTGCCCAGAGACTGTGCAGCGAAAAAAGTGCCGCATCCGAAAATGCCTTCGAAATCCATCCATCCAAAAGCTACGCTGGAGGGAGGCCCGAGAGAGCCGGCGGAGTGAGCAGCTGAAGGAAGAGTCTGAAGGGGAGCAGTTCCCAGGTTGTAGGATGCGCCCATGGACGGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGAATTCAGGAACGTTACATGACTGTAAAGAAGAGATTCAAAAGCTCCCAGTTTACCAGCTGCAAAGACAAGAAGGAGATCAGAGCATGCAATGTTCATCCTTGTTAG
Amino sequence
MRLSPAPLKLSRTPALLALALPLAAALAFSDETLDKVPKSEGYCSRILRAQGTRREGYTEFSLRVEGDPDFYKPGTSYRVTLSAAPPSYFRGFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTFYGNWSEKTHPKDYPRRANHWSAIIGGSHSKNYVLWEYGGYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKAKAQWPAWQPLNVRAAPSAEFSVDRTRHLMSFLTMMGPSPDWNVGLSAEDLCTKECGWVQKVVQDLIPWDAGTDSGVTYESPNKPTIPQEKIRPLTSLDHPQSPFYDPEGGSITQVARVVIERIARKGEQCNIVPDNVDDIVADLAPEEKDEDDTPETCIYSNWSPWSACSSSTCDKGKRMRQRMLKAQLDLSVPCPDTQDFQPCMGPGCSDEDGSTCTMSEWITWSPCSISCGMGMRSRERYVKQFPEDGSVCTLPTEETEKCTVNEECSPSSCLMTEWGEWDECSATCGMGMKKRHRMIKMNPADGSMCKAETSQAEKCMMPECHTIPCLLSPWSEWSDCSVTCGKGMRTRQRMLKSLAELGDCNEDLEQVEKCMLPECPIDCELTEWSQWSECNKSCGKGHVIRTRMIQMEPQFGGAPCPETVQRKKCRIRKCLRNPSIQKLRWREARESRRSEQLKEESEGEQFPGCRMRPWTAWSECTKLCGGGIQERYMTVKKRFKSSQFTSCKDKKEIRACNVHPC*