ENST00000576479.4 SPON1

Information
Transcript ID
ENST00000576479.4
Genome
hg19
Position
chr11:13,984,270-14,289,679
Strand
+
CDS length
2,423
Amino acid length
807.667
Gene symbol
SPON1
Gene type
protein-coding
Gene description
spondin 1
Gene Entrez Gene ID
10418
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 13,984,270 13,984,689
2 14,004,394 14,004,500
3 14,063,068 14,063,201
4 14,096,892 14,096,965
5 14,101,446 14,101,493
6 14,101,494 14,101,567
7 14,156,966 14,157,114
8 14,264,878 14,264,942
9 14,276,074 14,276,275
10 14,277,193 14,277,333
11 14,278,163 14,278,238
12 14,279,262 14,279,444
13 14,280,826 14,280,996
14 14,281,080 14,281,247
15 14,282,134 14,282,298
16 14,284,258 14,284,521
17 14,287,070 14,289,679
CDS
Exon number Type Start Stop
1 CDS 13,984,452 13,984,689
2 CDS 14,004,394 14,004,500
3 CDS 14,063,068 14,063,201
4 CDS 14,096,892 14,096,965
5 CDS 14,101,446 14,101,493
6 CDS 14,101,494 14,101,567
7 CDS 14,156,966 14,157,114
8 CDS 14,264,878 14,264,942
9 CDS 14,276,074 14,276,275
10 CDS 14,277,193 14,277,333
11 CDS 14,278,163 14,278,238
12 CDS 14,279,262 14,279,444
13 CDS 14,280,826 14,280,996
14 CDS 14,281,080 14,281,247
15 CDS 14,282,134 14,282,298
16 CDS 14,284,258 14,284,521
17 CDS 14,287,070 14,287,233
Other genome
Genome Chromosome Start End Links
hg38 chr11 13,962,723 14,268,133 Link
CDS sequence
ATGAGGCTGTCCCCGGCGCCCCTGAAGCTGAGCCGGACTCCGGCACTGCTGGCCCTGGCGCTGCCCCTGGCCGCGGCGCTGGCCTTCTCCGACGAGACCCTGGACAAAGTGCCCAAGTCAGAGGGCTACTGCAGCCGTATCCTGCGCGCCCAGGGCACGCGGCGCGAGGGCTACACCGAGTTCAGCCTCCGCGTGGAGGGCGACCCCGACTTCTACAAGCCGGGAACCAGCTACCGCGTAACACTTTCAGCTGCTCCTCCCTCCTACTTCAGAGGATTCACATTAATTGCCCTCAGAGAGAACAGAGAGGGTGATAAGGAAGAAGACCATGCTGGGACCTTCCAGATCATAGACGAAGAAGAAACTCAGTTTATGAGCAATTGCCCTGTTGCAGTCACTGAAAGCACTCCACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGCGTGATTCTGAAGGCCAGCATCGTACAAAAACGCATTATTTATTTTCAAGATGAGGGCTCTCTGACCAAGAAACTTTGTGAACAAGATTCCACATTTGATGGGGTGACTGACAAACCCATCTTAGACTGCTGTGCTGCGGAACTGCCAAGTACAGACTCACATTTTATGGGAATTGGTCCGAGAAGACACACCCAAAGGATTACCCTCGTCGGGCCAACCACTGGTCTGCGATCATCGGAGGATCCCACTCCAAGAATTATGTACTGTGGGAATATGGAGGATATGCCAGCGAAGGCGTCAAACAAGTTGCAGAATTGGGCTCACCCGTGAAAATGGAGGAAGAAATTCGACAACAGAGTGATGAGGTCCTCACCGTCATCAAAGCCAAAGCCCAATGGCCAGCCTGGCAGCCTCTCAACGTGAGAGCAGCACCTTCAGCTGAATTTTCCGTGGACAGAACGCGCCATTTAATGTCCTTCCTGACCATGATGGGCCCTAGTCCCGACTGGAACGTAGGCTTATCTGCAGAAGATCTGTGCACCAAGGAATGTGGCTGGGTCCAGAAGGTGGTGCAAGACCTGATTCCCTGGGACGCTGGCACCGACAGCGGGGTGACCTATGAGTCACCCAACAAACCCACCATTCCCCAGGAGAAAATCCGGCCCCTGACCAGCCTGGACCATCCTCAGAGTCCTTTCTATGACCCAGAGGGTGGGTCCATCACTCAAGTAGCCAGAGTTGTCATCGAGAGAATCGCACGGAAGGGTGAACAATGCAATATTGTACCTGACAATGTCGATGATATTGTAGCTGACCTGGCTCCAGAAGAGAAAGATGAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCAAGAGGATGCGACAGCGCATGCTGAAAGCACAGCTGGACCTCAGCGTCCCCTGCCCTGACACCCAGGACTTCCAGCCCTGCATGGGCCCTGGCTGCAGTGACGAAGACGGCTCCACCTGCACCATGTCCGAGTGGATCACCTGGTCGCCCTGCAGCATCTCCTGCGGCATGGGCATGAGGTCCCGGGAGAGGTATGTGAAGCAGTTCCCGGAGGACGGCTCCGTGTGCACGCTGCCCACTGAGGAAACGGAGAAGTGCACGGTCAACGAGGAGTGCTCTCCCAGCAGCTGCCTGATGACCGAGTGGGGCGAGTGGGACGAGTGCAGCGCCACCTGCGGCATGGGCATGAAGAAGCGGCACCGCATGATCAAGATGAACCCCGCAGATGGCTCCATGTGCAAAGCCGAGACATCACAGGCAGAGAAGTGCATGATGCCAGAGTGCCACACCATCCCATGCTTGCTGTCCCCATGGTCCGAGTGGAGTGACTGCAGCGTGACCTGCGGGAAGGGCATGCGAACCCGACAGCGGATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGGTGGAGAAGTGCATGCTCCCTGAATGCCCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCATGTGGGAAAGGCCACGTGATTCGAACCCGGATGATCCAAATGGAGCCTCAGTTTGGAGGTGCACCCTGCCCAGAGACTGTGCAGCGAAAAAAGTGCCGCATCCGAAAATGCCTTCGAAATCCATCCATCCAAAAGCTACGCTGGAGGGAGGCCCGAGAGAGCCGGCGGAGTGAGCAGCTGAAGGAAGAGTCTGAAGGGGAGCAGTTCCCAGGTTGTAGGATGCGCCCATGGACGGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGAATTCAGGAACGTTACATGACTGTAAAGAAGAGATTCAAAAGCTCCCAGTTTACCAGCTGCAAAGACAAGAAGGAGATCAGAGCATGCAATGTTCATCCTTGTTAG
Amino sequence
MRLSPAPLKLSRTPALLALALPLAAALAFSDETLDKVPKSEGYCSRILRAQGTRREGYTEFSLRVEGDPDFYKPGTSYRVTLSAAPPSYFRGFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDSTFDGVTDKPILDCCAAELPSTDSHFMGIGPRRHTQRITLVGPTTGLRSSEDPTPRIMYCGNMEDMPAKASNKLQNWAHP*KWRKKFDNRVMRSSPSSKPKPNGQPGSLST*EQHLQLNFPWTERAI*CPS*P*WALVPTGT*AYLQKICAPRNVAGSRRWCKT*FPGTLAPTAG*PMSHPTNPPFPRRKSGP*PAWTILRVLSMTQRVGPSLK*PELSSRESHGRVNNAILYLTMSMIL*LTWLQKRKMKMTPLKPASTPTGPHGPPAAPPPVTKARGCDSAC*KHSWTSASPALTPRTSSPAWALAAVTKTAPPAPCPSGSPGRPAASPAAWA*GPGRGM*SSSRRTAPCARCPLRKRRSARSTRSALPAAA**PSGASGTSAAPPAAWA*RSGTA*SR*TPQMAPCAKPRHHRQRSA*CQSATPSHACCPHGPSGVTAA*PAGRACEPDSGCSSLWQNLETAMRIWSRWRSACSLNAPLTVSSPSGPSGRNVTSHVGKAT*FEPG*SKWSLSLEVHPAQRLCSEKSAASENAFEIHPSKSYAGGRPERAGGVSS*RKSLKGSSSQVVGCAHGRPGQNAPNCAEVEFRNVT*L*RRDSKAPSLPAAKTRRRSEHAMFILV