ENST00000664989.1 LINC00539
Information
- Transcript ID
- ENST00000664989.1
- Genome
- hg38
- Position
- chr13:21,303,512-21,337,314
- Strand
- -
- CDS length
- 0
- Amino acid length
- 0
- Gene symbol
- LINC00539
- Gene type
- ncRNA
- Gene description
- long intergenic non-protein coding RNA 539
- Gene Entrez Gene ID
- 100652865
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
7 | 21,303,512 | 21,303,820 |
6 | 21,311,042 | 21,311,118 |
5 | 21,312,146 | 21,312,360 |
4 | 21,312,452 | 21,312,555 |
3 | 21,312,639 | 21,312,761 |
2 | 21,330,574 | 21,330,658 |
1 | 21,336,838 | 21,337,314 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr13 | 21,877,651 | 21,911,453 | Link |
CDS sequence
Amino sequence