LINC00539 long intergenic non-protein coding RNA 539

Information
Symbol
LINC00539
Type
ncRNA
Description
long intergenic non-protein coding RNA 539
Entrez Gene ID
100652865
Genome
hg19
Position
chr13:21,877,001-21,887,551
Genome
hg38
Position
chr13:21,302,862-21,313,412
HGNC
HGNC:43672 HGNC
Ensembl
ENSG00000224429 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Ranking
ClinVar
0
0
0
0
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM LINC00422
HGNC HGNC:43672 HGNC
Ensembl ENSG00000224429 Ensembl
AllianceGenome HGNC:43672
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000700723.1 hg38 chr13 21,323,261 21,362,139 38,879
ENST00000664989.1 hg38 chr13 21,303,512 21,337,314 33,803
ENST00000667082.1 hg38 chr13 21,302,862 21,313,412 10,551
ENST00000667082.1 hg19 chr13 21,877,001 21,887,551 10,551
ENST00000664989.1 hg19 chr13 21,877,651 21,911,453 33,803
ENST00000700723.1 hg19 chr13 21,897,400 21,936,278 38,879
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