ENST00000246802.10 NOP53

Information
Transcript ID
ENST00000246802.10
Genome
hg38
Position
chr19:47,745,546-47,757,058
Strand
+
CDS length
1,437
Amino acid length
479
Gene symbol
NOP53
Gene type
protein-coding
Gene description
NOP53 ribosome biogenesis factor
Gene Entrez Gene ID
29997
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 47,745,546 47,745,783
2 47,746,967 47,747,031
3 47,750,178 47,750,286
4 47,750,908 47,751,107
5 47,751,520 47,751,590
6 47,752,512 47,752,607
7 47,754,527 47,754,631
8 47,754,709 47,754,891
9 47,755,348 47,755,523
10 47,755,756 47,755,822
11 47,756,528 47,756,604
12 47,756,688 47,756,744
13 47,756,999 47,757,058
CDS
Exon number Type Start Stop
1 CDS 47,745,560 47,745,783
2 CDS 47,746,967 47,747,031
3 CDS 47,750,178 47,750,286
4 CDS 47,750,908 47,751,107
5 CDS 47,751,520 47,751,590
6 CDS 47,752,512 47,752,607
7 CDS 47,754,527 47,754,631
8 CDS 47,754,709 47,754,891
9 CDS 47,755,348 47,755,523
10 CDS 47,755,756 47,755,822
11 CDS 47,756,528 47,756,604
12 CDS 47,756,688 47,756,744
13 CDS 47,756,999 47,757,005
Other genome
Genome Chromosome Start End Links
hg19 chr19 48,248,803 48,260,315 Link
CDS sequence
ATGGCGGCAGGAGGCAGTGGCGTTGGTGGGAAGCGCAGCTCGAAAAGCGATGCCGATTCTGGTTTCCTGGGGCTGCGGCCCACTTCGGTGGACCCAGCGCTGAGGCGGCGGCGGCGAGGCCCAAGAAATAAGAAGCGGGGCTGGCGGCGGCTTGCTCAGGAGCCGCTGGGGCTGGAGGTTGACCAGTTCCTGGAAGACGTGCGGCTACAGGAGCGCACGAGCGGTGGCTTGTTGTCAGAGGCCCCAAATGAAAAACTCTTCTTCGTGGACACTGGCTCCAAGGAAAAAGGGCTGACAAAGAAGAGAACCAAAGTCCAGAAGAAGTCACTGCTTCTCAAGAAACCCCTTCGGGTTGACCTCATCCTCGAGAACACATCCAAAGTCCCTGCCCCCAAAGACGTCCTCGCCCACCAGGTCCCCAACGCCAAGAAGCTCAGGCGGAAGGAGCAGCTATGGGAGAAGCTGGCCAAGCAGGGCGAGCTGCCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTGCAACAAGGGCCAAGCCCGGGCCCCAGGACACCGTAGAGCGGCCCTTCTACGACCTCTGGGCCTCAGACAACCCCCTGGACAGGCCGTTGGTTGGCCAGGATGAGTTTTTCCTGGAGCAGACCAAGAAGAAAGGAGTGAAGCGGCCAGCACGCCTGCACACCAAGCCGTCCCAGGCACCCGCCGTGGAGGTGGCGCCTGCCGGAGCTTCCTACAATCCATCCTTTGAAGACCACCAGACCCTGCTCTCAGCGGCCCACGAGGTGGAGTTGCAGCGGCAGAAGGAGGCGGAGAAGCTGGAGCGGCAGCTGGCCCTGCCCGCCACGGAGCAGGCCGCCACCCAGGAGTCCACATTCCAGGAGCTGTGCGAGGGGCTGCTGGAGGAGTCGGATGGTGAGGGGGAGCCAGGCCAGGGCGAGGGGCCGGAGGCTGGGGATGCCGAGGTCTGTCCCACGCCCGCCCGCCTGGCCACCACAGAGAAGAAGACGGAGCAGCAGCGGCGGCGGGAGAAGGCTGTGCACAGGCTGCGGGTACAGCAGGCCGCGTTGCGGGCCGCCCGGCTCCGGCACCAGGAGCTGTTCCGGCTGCGCGGGATCAAGGCCCAGGTGGCCCTGAGGCTGGCGGAGCTGGCGCGGCGGCAGAGGCGGCGGCAGGCGCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGGCGGCTCAAGTACCAGGCACCTGACATCGACGTGCAGCTGAGCTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTCCAGAGGAGGAATATGATCGAGCCTCGAGAGAGAGCCAAGTTCAAACGCAAGTACAAGGTGAAGCTGGTGGAGAAGCGGGCGTTCCGTGAGATCCAGTTGTAG
Amino sequence
MAAGGSGVGGKRSSKSDADSGFLGLRPTSVDPALRRRRRGPRNKKRGWRRLAQEPLGLEVDQFLEDVRLQERTSGGLLSEAPNEKLFFVDTGSKEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKEQLWEKLAKQGELPREVRRAQARLLNPSATRAKPGPQDTVERPFYDLWASDNPLDRPLVGQDEFFLEQTKKKGVKRPARLHTKPSQAPAVEVAPAGASYNPSFEDHQTLLSAAHEVELQRQKEAEKLERQLALPATEQAATQESTFQELCEGLLEESDGEGEPGQGEGPEAGDAEVCPTPARLATTEKKTEQQRRREKAVHRLRVQQAALRAARLRHQELFRLRGIKAQVALRLAELARRQRRRQARREAEADKPRRLGRLKYQAPDIDVQLSSELTDSLRTLKPEGNILRDRFKSFQRRNMIEPRERAKFKRKYKVKLVEKRAFREIQL*