ENST00000246802.10 NOP53
Information
- Transcript ID
- ENST00000246802.10
- Genome
- hg19
- Position
- chr19:48,248,803-48,260,315
- Strand
- +
- CDS length
- 1,437
- Amino acid length
- 479
- Gene symbol
- NOP53
- Gene type
- protein-coding
- Gene description
- NOP53 ribosome biogenesis factor
- Gene Entrez Gene ID
- 29997
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 48,248,803 | 48,249,040 |
| 2 | 48,250,224 | 48,250,288 |
| 3 | 48,253,435 | 48,253,543 |
| 4 | 48,254,165 | 48,254,364 |
| 5 | 48,254,777 | 48,254,847 |
| 6 | 48,255,769 | 48,255,864 |
| 7 | 48,257,784 | 48,257,888 |
| 8 | 48,257,966 | 48,258,148 |
| 9 | 48,258,605 | 48,258,780 |
| 10 | 48,259,013 | 48,259,079 |
| 11 | 48,259,785 | 48,259,861 |
| 12 | 48,259,945 | 48,260,001 |
| 13 | 48,260,256 | 48,260,315 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 48,248,817 | 48,249,040 |
| 2 | CDS | 48,250,224 | 48,250,288 |
| 3 | CDS | 48,253,435 | 48,253,543 |
| 4 | CDS | 48,254,165 | 48,254,364 |
| 5 | CDS | 48,254,777 | 48,254,847 |
| 6 | CDS | 48,255,769 | 48,255,864 |
| 7 | CDS | 48,257,784 | 48,257,888 |
| 8 | CDS | 48,257,966 | 48,258,148 |
| 9 | CDS | 48,258,605 | 48,258,780 |
| 10 | CDS | 48,259,013 | 48,259,079 |
| 11 | CDS | 48,259,785 | 48,259,861 |
| 12 | CDS | 48,259,945 | 48,260,001 |
| 13 | CDS | 48,260,256 | 48,260,262 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr19 | 47,745,546 | 47,757,058 | Link |
CDS sequence
ATGGCGGCAGGAGGCAGTGGCGTTGGTGGGAAGCGCAGCTCGAAAAGCGATGCCGATTCTGGTTTCCTGGGGCTGCGGCCCACTTCGGTGGACCCAGCGCTGAGGCGGCGGCGGCGAGGCCCAAGAAATAAGAAGCGGGGCTGGCGGCGGCTTGCTCAGGAGCCGCTGGGGCTGGAGGTTGACCAGTTCCTGGAAGACGTGCGGCTACAGGAGCGCACGAGCGGTGGCTTGTTGTCAGAGGCCCCAAATGAAAAACTCTTCTTCGTGGACACTGGCTCCAAGGAAAAAGGGCTGACAAAGAAGAGAACCAAAGTCCAGAAGAAGTCACTGCTTCTCAAGAAACCCCTTCGGGTTGACCTCATCCTCGAGAACACATCCAAAGTCCCTGCCCCCAAAGACGTCCTCGCCCACCAGGTCCCCAACGCCAAGAAGCTCAGGCGGAAGGAGCAGCTATGGGAGAAGCTGGCCAAGCAGGGCGAGCTGCCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTGCAACAAGGGCCAAGCCCGGGCCCCAGGACACCGTAGAGCGGCCCTTCTACGACCTCTGGGCCTCAGACAACCCCCTGGACAGGCCGTTGGTTGGCCAGGATGAGTTTTTCCTGGAGCAGACCAAGAAGAAAGGAGTGAAGCGGCCAGCACGCCTGCACACCAAGCCGTCCCAGGCACCCGCCGTGGAGGTGGCGCCTGCCGGAGCTTCCTACAATCCATCCTTTGAAGACCACCAGACCCTGCTCTCAGCGGCCCACGAGGTGGAGTTGCAGCGGCAGAAGGAGGCGGAGAAGCTGGAGCGGCAGCTGGCCCTGCCCGCCACGGAGCAGGCCGCCACCCAGGAGTCCACATTCCAGGAGCTGTGCGAGGGGCTGCTGGAGGAGTCGGATGGTGAGGGGGAGCCAGGCCAGGGCGAGGGGCCGGAGGCTGGGGATGCCGAGGTCTGTCCCACGCCCGCCCGCCTGGCCACCACAGAGAAGAAGACGGAGCAGCAGCGGCGGCGGGAGAAGGCTGTGCACAGGCTGCGGGTACAGCAGGCCGCGTTGCGGGCCGCCCGGCTCCGGCACCAGGAGCTGTTCCGGCTGCGCGGGATCAAGGCCCAGGTGGCCCTGAGGCTGGCGGAGCTGGCGCGGCGGCAGAGGCGGCGGCAGGCGCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGGCGGCTCAAGTACCAGGCACCTGACATCGACGTGCAGCTGAGCTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTCCAGAGGAGGAATATGATCGAGCCTCGAGAGAGAGCCAAGTTCAAACGCAAGTACAAGGTGAAGCTGGTGGAGAAGCGGGCGTTCCGTGAGATCCAGTTGTAG
Amino sequence
MAAGGSGVGGKRSSKSDADSGFLGLRPTSVDPALRRRRRGPRNKKRGWRRLAQEPLGLEVDQFLEDVRLQERTSGGLLSEAPNEKLFFVDTGSKEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKEQLWEKLAKQGELPREVRRAQARLLNPSATRAKPGPQDTVERPFYDLWASDNPLDRPLVGQDEFFLEQTKKKGVKRPARLHTKPSQAPAVEVAPAGASYNPSFEDHQTLLSAAHEVELQRQKEAEKLERQLALPATEQAATQESTFQELCEGLLEESDGEGEPGQGEGPEAGDAEVCPTPARLATTEKKTEQQRRREKAVHRLRVQQAALRAARLRHQELFRLRGIKAQVALRLAELARRQRRRQARREAEADKPRRLGRLKYQAPDIDVQLSSELTDSLRTLKPEGNILRDRFKSFQRRNMIEPRERAKFKRKYKVKLVEKRAFREIQL*