ENST00000680537.1 MS4A4A
Information
- Transcript ID
- ENST00000680537.1
- Genome
- hg38
- Position
- chr11:60,185,991-60,308,960
- Strand
- +
- CDS length
- 663
- Amino acid length
- 221
- Gene symbol
- MS4A4A
- Gene type
- protein-coding
- Gene description
- membrane spanning 4-domains A4A
- Gene Entrez Gene ID
- 51338
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 60,185,991 | 60,186,171 |
2 | 60,229,458 | 60,229,616 |
3 | 60,292,225 | 60,292,384 |
4 | 60,297,197 | 60,297,325 |
5 | 60,301,001 | 60,301,057 |
6 | 60,302,559 | 60,302,717 |
7 | 60,306,100 | 60,306,201 |
8 | 60,308,107 | 60,308,960 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
3 | CDS | 60,292,241 | 60,292,384 |
4 | CDS | 60,297,197 | 60,297,325 |
5 | CDS | 60,301,001 | 60,301,057 |
6 | CDS | 60,302,559 | 60,302,717 |
7 | CDS | 60,306,100 | 60,306,201 |
8 | CDS | 60,308,107 | 60,308,178 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr11 | 59,953,464 | 60,076,433 | Link |
CDS sequence
ATGACAACCATGCAAGGAATGGAACAGGCCATGCCAGGGGCTGGCCCTGGTGTGCCCCAGCTGGGAAACATGGCTGTCATACATTCACATCTGTGGAAAGGATTGCAAGAGAAGTTCTTGAAGGGAGAACCCAAAGTCCTTGGGGTTGTGCAGATTCTGACTGCCCTGATGAGCCTTAGCATGGGAATAACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGGTACACAATTTGGGGGTCAGTAATGTTTATTATTTCAGGATCCTTGTCAATTGCAGCAGGAATTAGAACTACAAAAGGCCTGGTCCGAGGTAGTCTAGGAATGAATATCACCAGCTCTGTACTGGCTGCATCAGGGATCTTAATCAACACATTTAGCTTGGCGTTTTATTCATTCCATCACCCTTACTGTAACTACTATGGCAACTCAAATAATTGTCATGGGACTATGTCCATCTTAATGGGTCTGGATGGCATGGTGCTCCTCCTAAGTGTGCTGGAATTCTGCATTGCTGTGTCCCTCTCTGCCTTTGGATGTAAAGTGCTCTGTTGTACCCCTGGTGGGGTTGTGTTAATTCTGCCATCACATTCTCACATGGCAGAAACAGCATCTCCCACACCACTTAATGAGGTTTGA
Amino sequence
MTTMQGMEQAMPGAGPGVPQLGNMAVIHSHLWKGLQEKFLKGEPKVLGVVQILTALMSLSMGITMMCMASNTYGSNPISVYIGYTIWGSVMFIISGSLSIAAGIRTTKGLVRGSLGMNITSSVLAASGILINTFSLAFYSFHHPYCNYYGNSNNCHGTMSILMGLDGMVLLLSVLEFCIAVSLSAFGCKVLCCTPGGVVLILPSHSHMAETASPTPLNEV*