ENST00000311798.5 SSX5
Information
- Transcript ID
- ENST00000311798.5
- Genome
- hg38
- Position
- chrX:48,186,220-48,196,763
- Strand
- -
- CDS length
- 690
- Amino acid length
- 230
- Gene symbol
- SSX5
- Gene type
- protein-coding
- Gene description
- SSX family member 5
- Gene Entrez Gene ID
- 6758
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 48,186,220 | 48,186,856 |
| 8 | 48,187,627 | 48,187,731 |
| 7 | 48,190,133 | 48,190,268 |
| 6 | 48,192,232 | 48,192,281 |
| 5 | 48,194,129 | 48,194,224 |
| 4 | 48,194,740 | 48,194,854 |
| 3 | 48,195,007 | 48,195,129 |
| 2 | 48,195,290 | 48,195,378 |
| 1 | 48,196,731 | 48,196,763 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 48,187,631 | 48,187,731 |
| 7 | CDS | 48,190,133 | 48,190,268 |
| 6 | CDS | 48,192,232 | 48,192,281 |
| 5 | CDS | 48,194,129 | 48,194,224 |
| 4 | CDS | 48,194,740 | 48,194,854 |
| 3 | CDS | 48,195,007 | 48,195,129 |
| 2 | CDS | 48,195,290 | 48,195,358 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 48,045,656 | 48,056,199 | Link |
CDS sequence
ATGAACGGAGACGATGCCTTTGTACGGAGACCTAGGGTTGGTTCTCAAATACCAGAGAAGATGCAAAAGCATCCCTGGAGACAAGTCTGTGACCGTGGAATACATTTGGTGAATCTCAGTCCGTTCTGGAAGGTGGGAAGAGAGCCAGCCAGCAGCATTAAAGCTCTACTGTGTGGCAGGGGAGAAGCTAGGGCCTTCGATGATATTGCCAAATACTTCTCTGAGAAAGAGTGGGAAAAGATGAAAGCCTCGGAGAAAATCATCTATGTGTATATGAAGAGAAAGTATGAGGCCATGACTAAACTAGGTTTCAAGGCCACCCTCCCACCTTTCATGCGTAATAAACGGGTCGCAGACTTCCAGGGGAATGATTTTGATAATGACCCTAACCGTGGGAATCAGGTTGAACATCCTCAGATGACTTTCGGCAGGCTCCAGGGAATCTTCCCGAAGATCACGCCCGAGAAGCCAGCAGAGGAAGGAAATGATTCGAAGGGAGTGCCAGAAGCATCTGGCCCACAGAACAATGGGAAACAGCTGCGCCCCTCAGGAAAACTAAATACCTCTGAGAAGGTTAACAAGACATCTGGACCCAAAAGGGGGAAACATGCCTGGACCCACAGAGTGCGTGAGAGAAAGCAACTGGTGATTTATGAAGAGATCAGCGACCCTCAGGAAGATGACGAGTAA
Amino sequence
MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGRGEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE*