ENST00000311798.5 SSX5
Information
- Transcript ID
- ENST00000311798.5
- Genome
- hg19
- Position
- chrX:48,045,656-48,056,199
- Strand
- -
- CDS length
- 690
- Amino acid length
- 230
- Gene symbol
- SSX5
- Gene type
- protein-coding
- Gene description
- SSX family member 5
- Gene Entrez Gene ID
- 6758
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 48,045,656 | 48,046,292 |
| 8 | 48,047,063 | 48,047,167 |
| 7 | 48,049,569 | 48,049,704 |
| 6 | 48,051,668 | 48,051,717 |
| 5 | 48,053,565 | 48,053,660 |
| 4 | 48,054,176 | 48,054,290 |
| 3 | 48,054,443 | 48,054,565 |
| 2 | 48,054,726 | 48,054,814 |
| 1 | 48,056,167 | 48,056,199 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 48,047,067 | 48,047,167 |
| 7 | CDS | 48,049,569 | 48,049,704 |
| 6 | CDS | 48,051,668 | 48,051,717 |
| 5 | CDS | 48,053,565 | 48,053,660 |
| 4 | CDS | 48,054,176 | 48,054,290 |
| 3 | CDS | 48,054,443 | 48,054,565 |
| 2 | CDS | 48,054,726 | 48,054,794 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chrX | 48,186,220 | 48,196,763 | Link |
CDS sequence
ATGAACGGAGACGATGCCTTTGTACGGAGACCTAGGGTTGGTTCTCAAATACCAGAGAAGATGCAAAAGCATCCCTGGAGACAAGTCTGTGACCGTGGAATACATTTGGTGAATCTCAGTCCGTTCTGGAAGGTGGGAAGAGAGCCAGCCAGCAGCATTAAAGCTCTACTGTGTGGCAGGGGAGAAGCTAGGGCCTTCGATGATATTGCCAAATACTTCTCTGAGAAAGAGTGGGAAAAGATGAAAGCCTCGGAGAAAATCATCTATGTGTATATGAAGAGAAAGTATGAGGCCATGACTAAACTAGGTTTCAAGGCCACCCTCCCACCTTTCATGCGTAATAAACGGGTCGCAGACTTCCAGGGGAATGATTTTGATAATGACCCTAACCGTGGGAATCAGGTTGAACATCCTCAGATGACTTTCGGCAGGCTCCAGGGAATCTTCCCGAAGATCACGCCCGAGAAGCCAGCAGAGGAAGGAAATGATTCGAAGGGAGTGCCAGAAGCATCTGGCCCACAGAACAATGGGAAACAGCTGCGCCCCTCAGGAAAACTAAATACCTCTGAGAAGGTTAACAAGACATCTGGACCCAAAAGGGGGAAACATGCCTGGACCCACAGAGTGCGTGAGAGAAAGCAACTGGTGATTTATGAAGAGATCAGCGACCCTCAGGAAGATGACGAGTAA
Amino sequence
MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGRGEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE*