ENST00000602212.6 NPAS1

Information
Transcript ID
ENST00000602212.6
Genome
hg38
Position
chr19:47,019,837-47,045,775
Strand
+
CDS length
1,773
Amino acid length
591
Gene symbol
NPAS1
Gene type
protein-coding
Gene description
neuronal PAS domain protein 1
Gene Entrez Gene ID
4861
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 47,019,837 47,019,997
2 47,021,006 47,021,169
3 47,021,612 47,021,847
4 47,032,278 47,032,351
5 47,032,643 47,032,732
6 47,035,964 47,036,129
7 47,039,036 47,039,151
8 47,039,407 47,039,564
9 47,040,444 47,040,550
10 47,040,978 47,041,125
11 47,042,810 47,042,904
12 47,045,191 47,045,775
CDS
Exon number Type Start Stop
2 CDS 47,021,048 47,021,169
3 CDS 47,021,612 47,021,847
4 CDS 47,032,278 47,032,351
5 CDS 47,032,643 47,032,732
6 CDS 47,035,964 47,036,129
7 CDS 47,039,036 47,039,151
8 CDS 47,039,407 47,039,564
9 CDS 47,040,444 47,040,550
10 CDS 47,040,978 47,041,125
11 CDS 47,042,810 47,042,904
12 CDS 47,045,191 47,045,651
Other genome
Genome Chromosome Start End Links
hg19 chr19 47,523,094 47,549,033 Link
CDS sequence
ATGGCGGCCCCCTATCCCGGCAGTGGCGGCGGAAGCGAGGTCAAATGCGTGGGAGGCCGCGGCGCCAGCGTCCCCTGGGACTTTCTACCCGGGCTGATGGTCAAGGCGCCGTCCGGACCGTGCCTGCAGGCGCAGCGCAAGGAGAAGTCCCGGAACGCGGCGCGCTCGCGGCGCGGGAAGGAGAACCTGGAGTTCTTCGAGCTGGCCAAGCTTCTCCCGCTGCCCGGCGCCATCTCCAGCCAGCTGGACAAGGCTTCCATCGTGCGCCTCAGCGTCACCTACCTCCGCCTGCGCCGGTTCGCCGCGCTGGGGGCGCCGCCCTGGGGGCTGAGAGCCGCGGGGCCGCCAGCTGGCCTCGCCCCAGGCCGCCGCGGCCCCGCAGCGCTGGTCTCCGAAGTCTTCGAGCAGCACCTGGGAGGTCACATCTTGCAGTCCCTGGATGGCTTTGTGTTCGCCTTGAACCAGGAAGGAAAATTCCTCTACATCTCAGAGACAGTCTCCATCTATCTGGGTCTCTCACAGGTGGAGATGACGGGCAGCAGCGTCTTCGACTACATTCACCCTGGGGACCACTCAGAGGTGCTGGAGCAACTGGGGCTGCGGACGCCGACGCCCGGCCCCCCAACCCCGCCCTCCGTCTCCTCTTCCTCCTCCTCTTCCTCTTCGCTTGCAGATACCCCCGAGATCGAGGCCAGCCTCACCAAGGTGCCCCCCTCCTCCCTGGTCCAGGAGCGCTCCTTCTTTGTCCGCATGAAATCCACGCTCACCAAGAGGGGGCTGCACGTCAAGGCCTCAGGGTACAAGGTCATCCACGTGACTGGGCGCCTTCGGGCCCACGCCCTGGGCCTTGTGGCCCTCGGGCACACGTTGCCCCCGGCCCCCCTGGCTGAGCTGCCACTCCATGGACACATGATCGTCTTCCGTCTCAGCCTGGGTCTCACCATCCTTGCTTGTGAGAGCAGAGTCAGCGACCACATGGACCTGGGGCCCTCAGAGCTGGTGGGCCGCAGCTGCTACCAGTTTGTCCACGGACAGGACGCCACGAGGATCCGCCAGAGCCACGTGGACTTGCTGGACAAGGGTCAGGTGATGACTGGTTACTACCGTTGGCTGCAGCGTGCCGGGGGCTTCGTGTGGCTGCAGTCTGTGGCCACAGTGGCTGGGAGCGGGAAGAGCCCCGGGGAGCACCATGTGCTTTGGGTCAGCCACGTGCTCAGCCAAGCCGAGGGTGGCCAAACTCCTTTGGATGCCTTCCAGCTTCCAGCCAGCGTGGCCTGTGAGGAGGCATCCAGCCCGGGGCCAGAGCCCACAGAGCCGGAGCCTCCGACGGAAGGGAAGCAGGCTGCCCCAGCGGAGAACGAGGCCCCCCAGACCCAGGGCAAACGCATCAAAGTGGAGCCCGGCCCGAGGGAAACCAAAGGCTCCGAGGACAGTGGCGACGAGGATCCCTCCAGCCACCCGGCCACACCGAGGCCCGAGTTCACCTCTGTCATCCGGGCAGGGGTCCTGAAGCAGGATCCGGTGCGGCCATGGGGCCTGGCGCCTCCCGGGGACCCCCCGCCCACCCTCCTGCACGCGGGCTTCCTGCCGCCGGTGGTGCGGGGCCTGTGCACACCCGGCACCATCCGCTACGGCCCCGCGGAGCTGGGCCTGGTGTACCCGCACCTGCAGAGGCTGGGTCCGGGCCCCGCGCTCCCGGAGGCCTTTTACCCGCCCCTGGGCCTGCCCTACCCGGGGCCCGCGGGCACCAGGCTGCCGCGGAAGGGGGACTGA
Amino sequence
MAAPYPGSGGGSEVKCVGGRGASVPWDFLPGLMVKAPSGPCLQAQRKEKSRNAARSRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGPPAGLAPGRRGPAALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASLTKVPPSSLVQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRAHALGLVALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHVDLLDKGQVMTGYYRWLQRAGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQAEGGQTPLDAFQLPASVACEEASSPGPEPTEPEPPTEGKQAAPAENEAPQTQGKRIKVEPGPRETKGSEDSGDEDPSSHPATPRPEFTSVIRAGVLKQDPVRPWGLAPPGDPPPTLLHAGFLPPVVRGLCTPGTIRYGPAELGLVYPHLQRLGPGPALPEAFYPPLGLPYPGPAGTRLPRKGD*