ENST00000316843.9 LLGL1

Information
Transcript ID
ENST00000316843.9
Genome
hg38
Position
chr17:18,225,635-18,244,875
Strand
+
CDS length
3,195
Amino acid length
1,065
Gene symbol
LLGL1
Gene type
protein-coding
Gene description
LLGL scribble cell polarity complex component 1
Gene Entrez Gene ID
3996
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 18,225,635 18,225,763
2 18,229,941 18,230,038
3 18,232,495 18,232,576
4 18,232,672 18,232,802
5 18,233,778 18,233,936
6 18,234,013 18,234,175
7 18,234,273 18,234,408
8 18,234,649 18,234,703
9 18,234,839 18,234,993
10 18,235,089 18,235,312
11 18,235,470 18,235,537
12 18,236,607 18,236,760
13 18,236,835 18,236,939
14 18,237,481 18,237,773
15 18,238,067 18,238,214
16 18,238,456 18,238,609
17 18,240,578 18,240,873
18 18,241,451 18,241,715
19 18,241,885 18,241,999
20 18,242,166 18,242,278
21 18,242,508 18,242,628
22 18,242,743 18,242,822
23 18,243,908 18,244,875
CDS
Exon number Type Start Stop
1 CDS 18,225,683 18,225,763
2 CDS 18,229,941 18,230,038
3 CDS 18,232,495 18,232,576
4 CDS 18,232,672 18,232,802
5 CDS 18,233,778 18,233,936
6 CDS 18,234,013 18,234,175
7 CDS 18,234,273 18,234,408
8 CDS 18,234,649 18,234,703
9 CDS 18,234,839 18,234,993
10 CDS 18,235,089 18,235,312
11 CDS 18,235,470 18,235,537
12 CDS 18,236,607 18,236,760
13 CDS 18,236,835 18,236,939
14 CDS 18,237,481 18,237,773
15 CDS 18,238,067 18,238,214
16 CDS 18,238,456 18,238,609
17 CDS 18,240,578 18,240,873
18 CDS 18,241,451 18,241,715
19 CDS 18,241,885 18,241,999
20 CDS 18,242,166 18,242,278
21 CDS 18,242,508 18,242,628
22 CDS 18,242,743 18,242,821
Other genome
Genome Chromosome Start End Links
hg19 chr17 18,128,949 18,148,189 Link
CDS sequence
ATGATGAAGTTTCGGTTCCGGCGGCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGCCTTCAACAAGACTGTGGAGCATGGCTTCCCCAATCAGCCCAGCGCCCTGGCCTTCGACCCGGAACTTCGCATCATGGCCATCGGCACCAGGTCTGGGGCTGTCAAGATCTATGGTGCACCTGGCGTGGAGTTCACAGGCCTGCACCGGGATGCAGCCACTGTCACACAGATGCACTTCTTGACCGGCCAGGGCCGCCTCCTGTCCCTGCTTGATGACAGCAGTCTGCATCTCTGGGAGATTGTCCACCATAATGGCTGTGCCCACCTGGAAGAAGCACTCAGTTTCCAGCTGCCCAGCCGGCCCGGCTTTGATGGTGCCAGTGCTCCGCTCAGCCTTACCCGAGTCACAGTGGTCCTGCTGGTGGCTGCCAGCGACATAGCAGCCCTGGGCACTGAGGGCAGCAGTGTCTTCTTCCTGGATGTTACCACCCTGACCCTGCTCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGCAGCGTGCCAGACGACTACCGCTGTGGGAAGGCACTGGGCCCCGTGGAGTCACTCCAGGGACACCTGCGGGACCCCACAAAGATTCTCATTGGCTACAGCCGGGGCCTGCTGGTCATCTGGAACCAGGCCTCGCAGTGTGTGGACCACATCTTCCTGGGGAACCAGCAGCTGGAGAGCCTATGCTGGGGGCGTGATAGCAGCACTGTGGTCAGCTCACACAGCGATGGCAGCTATGCTGTCTGGTCTGTGGATGCCGGCAGCTTCCCAACGCTGCAGCCCACGGTAGCCACCACACCTTACGGCCCCTTTCCCTGCAAGGCCATTAACAAGATTCTGTGGCGGAACTGTGAATCTGGGGGCCACTTTATCATCTTCAGCGGTGGCATGCCCCGTGCCAGCTATGGTGACCGCCACTGTGTAAGTGTGCTTCGAGCCGAGACATTGGTGACGCTGGACTTCACTTCCCGCATCATCGACTTCTTCACAGTGCACAGCACACGGCCCGAGGATGAATTTGATGACCCCCAGGCCCTGGCTGTGCTGCTGGAAGAGGAGCTGGTGGTGCTGGACCTGCAGACTCCTGGCTGGCCAGCTGTGCCTGCCCCATACCTGGCCCCGCTGCACTCCTCTGCAATCACTTGCTCGGCCCACGTGGCCAGTGTCCCCGCCAAGCTGTGGGCCCGCATTGTGAGCGCTGGCGAGCAGCAGAGCCCCCAGCCTGTCTCCAGTGCCTTGAGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTGCTGACGGGCCATGAGGACGGCACCGTGAGGTTCTGGGATGCCTCGGGTGTGGCGCTGCGGCCGCTCTATAAGCTGAGCACAGCTGGCCTCTTCCAGACAGACTGTGAGCACGCTGACAGCCTGGCCCAGGCTGCCGAGGACGACTGGCCACCCTTCCGCAAGGTGGGCTGCTTCGATCCCTACAGTGACGATCCCCGGCTTGGCGTGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAGGCCAGGTGCTGGTACTGGAGCTTAGTGATGTGCCGGTGGAGCAGGCGGTCAGCGTGGCCATCATAGACCTCCTCCAGGACCGCGAGGGCTTCACATGGAAGGGCCACGAGCGGCTGAGCCCACGCACGGGGCCGCTGCCCTGGCCTGCTGGCTTCCAGCCCCGTGTCCTGGTGCAGTGCCTGCCGCCAGCTGCTGTAACCGCTGTCACACTCCACACCGAGTGGAGCCTCGTGGCTTTTGGCACCAGTCATGGCTTTGGCCTCTTCGACTACCAGCGCAAGAGCCCTGTGCTGGCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGTGTCTCTGGCAAGAAGCGGGCTGCTAATGCCAGCAGCAAGTTGCAGGAAGCCAATGCACAGCTGGCTGAGCAGGCCTGCCCCCACGACGTGGAGATGACGCCCGTGCAGCGCCGCATTGAGCCCCGCTCTGCCGATGACTCCTTGTCGGGTGTCGTGCGTTGCCTATACTTTGCCGACACATTCCTTCGAGATGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCTATGCACTGGAGGTGCCGGCAGCAGCAGTGGGTGGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGTGCTGGGCAAGGAGGTGCAGCTGATGCACCGGGCGCCTGTGGTGGCCATTGCCGTGTTGGACGGGCGTGGCCGCCCACTGCCCGAGCCCTACGAGGCCTCACGGGACCTGGCGCAGGCACCTGACATGCAGGGTGGTCACGCTGTGCTCATCGCATCTGAGGAGCAGTTCAAGGTGTTCACACTGCCCAAGGTGAGCGCGAAGACCAAGTTCAAGCTGACGGCCCATGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGAGGACTATGCTGAGACCTGCCTGGCCTGCCTCACCAACCTGGGTGACGTCCACGTCTTCTCGGTGCCTGGCCTGCGGCCCCAGGTGCACTATTCCTGCATCCGGAAGGAGGACATCAGCGGCATCGCTTCGTGCGTCTTTACGCGCCATGGCCAGGGCTTTTACCTGATATCCCCATCAGAATTTGAACGCTTCTCCCTAAGTGCCCGGAACATCACAGAGCCGCTCTGCTCTCTGGACATTAACTGGCCCCGCGATGCCACCCAGGCCAGTTACAGGATCCGAGAGTCACCCAAGCTGAGCCAGGCTAACGGGACCCCAAGCATCCTGCTGGCCCCACAGAGCCTTGATGGAAGCCCTGATCCAGCCCACAGCATGGGACCTGACACCCCGGAGCCACCCGAGGCTGCACTCTCACCCATGTCCATCGACTCAGCCACCAGTGCTGACACCACGCTGGACACGACAGGGGACGTCACAGTGGAAGATGTGAAGGATTTCCTGGGCTCCTCTGAGGAGTCAGAGAAGAACCTGAGGAACCTGGCAGAAGACGAGGCCCACGCCTGTGCCATCCTGATCAAATGA
Amino sequence
MMKFRFRRQGADPQREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAPGVEFTGLHRDAATVTQMHFLTGQGRLLSLLDDSSLHLWEIVHHNGCAHLEEALSFQLPSRPGFDGASAPLSLTRVTVVLLVAASDIAALGTEGSSVFFLDVTTLTLLEGQTLAPGEVLRSVPDDYRCGKALGPVESLQGHLRDPTKILIGYSRGLLVIWNQASQCVDHIFLGNQQLESLCWGRDSSTVVSSHSDGSYAVWSVDAGSFPTLQPTVATTPYGPFPCKAINKILWRNCESGGHFIIFSGGMPRASYGDRHCVSVLRAETLVTLDFTSRIIDFFTVHSTRPEDEFDDPQALAVLLEEELVVLDLQTPGWPAVPAPYLAPLHSSAITCSAHVASVPAKLWARIVSAGEQQSPQPVSSALSWPITGGRNLAQEPSQRGLLLTGHEDGTVRFWDASGVALRPLYKLSTAGLFQTDCEHADSLAQAAEDDWPPFRKVGCFDPYSDDPRLGVQKVALCKYTAQMVVAGTAGQVLVLELSDVPVEQAVSVAIIDLLQDREGFTWKGHERLSPRTGPLPWPAGFQPRVLVQCLPPAAVTAVTLHTEWSLVAFGTSHGFGLFDYQRKSPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRAANASSKLQEANAQLAEQACPHDVEMTPVQRRIEPRSADDSLSGVVRCLYFADTFLRDGAHHGPTMWAGTNSGSVFAYALEVPAAAVGGEKRPEQAVEAVLGKEVQLMHRAPVVAIAVLDGRGRPLPEPYEASRDLAQAPDMQGGHAVLIASEEQFKVFTLPKVSAKTKFKLTAHEGCRVRKVALATFASVACEDYAETCLACLTNLGDVHVFSVPGLRPQVHYSCIRKEDISGIASCVFTRHGQGFYLISPSEFERFSLSARNITEPLCSLDINWPRDATQASYRIRESPKLSQANGTPSILLAPQSLDGSPDPAHSMGPDTPEPPEAALSPMSIDSATSADTTLDTTGDVTVEDVKDFLGSSEESEKNLRNLAEDEAHACAILIK*