ENST00000316843.9 LLGL1

Information
Transcript ID
ENST00000316843.9
Genome
hg19
Position
chr17:18,128,949-18,148,189
Strand
+
CDS length
3,195
Amino acid length
1,065
Gene symbol
LLGL1
Gene type
protein-coding
Gene description
LLGL scribble cell polarity complex component 1
Gene Entrez Gene ID
3996
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 18,128,949 18,129,077
2 18,133,255 18,133,352
3 18,135,809 18,135,890
4 18,135,986 18,136,116
5 18,137,092 18,137,250
6 18,137,327 18,137,489
7 18,137,587 18,137,722
8 18,137,963 18,138,017
9 18,138,153 18,138,307
10 18,138,403 18,138,626
11 18,138,784 18,138,851
12 18,139,921 18,140,074
13 18,140,149 18,140,253
14 18,140,795 18,141,087
15 18,141,381 18,141,528
16 18,141,770 18,141,923
17 18,143,892 18,144,187
18 18,144,765 18,145,029
19 18,145,199 18,145,313
20 18,145,480 18,145,592
21 18,145,822 18,145,942
22 18,146,057 18,146,136
23 18,147,222 18,148,189
CDS
Exon number Type Start Stop
1 CDS 18,128,997 18,129,077
2 CDS 18,133,255 18,133,352
3 CDS 18,135,809 18,135,890
4 CDS 18,135,986 18,136,116
5 CDS 18,137,092 18,137,250
6 CDS 18,137,327 18,137,489
7 CDS 18,137,587 18,137,722
8 CDS 18,137,963 18,138,017
9 CDS 18,138,153 18,138,307
10 CDS 18,138,403 18,138,626
11 CDS 18,138,784 18,138,851
12 CDS 18,139,921 18,140,074
13 CDS 18,140,149 18,140,253
14 CDS 18,140,795 18,141,087
15 CDS 18,141,381 18,141,528
16 CDS 18,141,770 18,141,923
17 CDS 18,143,892 18,144,187
18 CDS 18,144,765 18,145,029
19 CDS 18,145,199 18,145,313
20 CDS 18,145,480 18,145,592
21 CDS 18,145,822 18,145,942
22 CDS 18,146,057 18,146,135
Other genome
Genome Chromosome Start End Links
hg38 chr17 18,225,635 18,244,875 Link
CDS sequence
ATGATGAAGTTTCGGTTCCGGCGGCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGCCTTCAACAAGACTGTGGAGCATGGCTTCCCCAATCAGCCCAGCGCCCTGGCCTTCGACCCGGAACTTCGCATCATGGCCATCGGCACCAGGTCTGGGGCTGTCAAGATCTATGGTGCACCTGGCGTGGAGTTCACAGGCCTGCACCGGGATGCAGCCACTGTCACACAGATGCACTTCTTGACCGGCCAGGGCCGCCTCCTGTCCCTGCTTGATGACAGCAGTCTGCATCTCTGGGAGATTGTCCACCATAATGGCTGTGCCCACCTGGAAGAAGCACTCAGTTTCCAGCTGCCCAGCCGGCCCGGCTTTGATGGTGCCAGTGCTCCGCTCAGCCTTACCCGAGTCACAGTGGTCCTGCTGGTGGCTGCCAGCGACATAGCAGCCCTGGGCACTGAGGGCAGCAGTGTCTTCTTCCTGGATGTTACCACCCTGACCCTGCTCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGCAGCGTGCCAGACGACTACCGCTGTGGGAAGGCACTGGGCCCCGTGGAGTCACTCCAGGGACACCTGCGGGACCCCACAAAGATTCTCATTGGCTACAGCCGGGGCCTGCTGGTCATCTGGAACCAGGCCTCGCAGTGTGTGGACCACATCTTCCTGGGGAACCAGCAGCTGGAGAGCCTATGCTGGGGGCGTGATAGCAGCACTGTGGTCAGCTCACACAGCGATGGCAGCTATGCTGTCTGGTCTGTGGATGCCGGCAGCTTCCCAACGCTGCAGCCCACGGTAGCCACCACACCTTACGGCCCCTTTCCCTGCAAGGCCATTAACAAGATTCTGTGGCGGAACTGTGAATCTGGGGGCCACTTTATCATCTTCAGCGGTGGCATGCCCCGTGCCAGCTATGGTGACCGCCACTGTGTAAGTGTGCTTCGAGCCGAGACATTGGTGACGCTGGACTTCACTTCCCGCATCATCGACTTCTTCACAGTGCACAGCACACGGCCCGAGGATGAATTTGATGACCCCCAGGCCCTGGCTGTGCTGCTGGAAGAGGAGCTGGTGGTGCTGGACCTGCAGACTCCTGGCTGGCCAGCTGTGCCTGCCCCATACCTGGCCCCGCTGCACTCCTCTGCAATCACTTGCTCGGCCCACGTGGCCAGTGTCCCCGCCAAGCTGTGGGCCCGCATTGTGAGCGCTGGCGAGCAGCAGAGCCCCCAGCCTGTCTCCAGTGCCTTGAGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTGCTGACGGGCCATGAGGACGGCACCGTGAGGTTCTGGGATGCCTCGGGTGTGGCGCTGCGGCCGCTCTATAAGCTGAGCACAGCTGGCCTCTTCCAGACAGACTGTGAGCACGCTGACAGCCTGGCCCAGGCTGCCGAGGACGACTGGCCACCCTTCCGCAAGGTGGGCTGCTTCGATCCCTACAGTGACGATCCCCGGCTTGGCGTGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAGGCCAGGTGCTGGTACTGGAGCTTAGTGATGTGCCGGTGGAGCAGGCGGTCAGCGTGGCCATCATAGACCTCCTCCAGGACCGCGAGGGCTTCACATGGAAGGGCCACGAGCGGCTGAGCCCACGCACGGGGCCGCTGCCCTGGCCTGCTGGCTTCCAGCCCCGTGTCCTGGTGCAGTGCCTGCCGCCAGCTGCTGTAACCGCTGTCACACTCCACACCGAGTGGAGCCTCGTGGCTTTTGGCACCAGTCATGGCTTTGGCCTCTTCGACTACCAGCGCAAGAGCCCTGTGCTGGCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGTGTCTCTGGCAAGAAGCGGGCTGCTAATGCCAGCAGCAAGTTGCAGGAAGCCAATGCACAGCTGGCTGAGCAGGCCTGCCCCCACGACGTGGAGATGACGCCCGTGCAGCGCCGCATTGAGCCCCGCTCTGCCGATGACTCCTTGTCGGGTGTCGTGCGTTGCCTATACTTTGCCGACACATTCCTTCGAGATGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCTATGCACTGGAGGTGCCGGCAGCAGCAGTGGGTGGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGTGCTGGGCAAGGAGGTGCAGCTGATGCACCGGGCGCCTGTGGTGGCCATTGCCGTGTTGGACGGGCGTGGCCGCCCACTGCCCGAGCCCTACGAGGCCTCACGGGACCTGGCGCAGGCACCTGACATGCAGGGTGGTCACGCTGTGCTCATCGCATCTGAGGAGCAGTTCAAGGTGTTCACACTGCCCAAGGTGAGCGCGAAGACCAAGTTCAAGCTGACGGCCCATGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGAGGACTATGCTGAGACCTGCCTGGCCTGCCTCACCAACCTGGGTGACGTCCACGTCTTCTCGGTGCCTGGCCTGCGGCCCCAGGTGCACTATTCCTGCATCCGGAAGGAGGACATCAGCGGCATCGCTTCGTGCGTCTTTACGCGCCATGGCCAGGGCTTTTACCTGATATCCCCATCAGAATTTGAACGCTTCTCCCTAAGTGCCCGGAACATCACAGAGCCGCTCTGCTCTCTGGACATTAACTGGCCCCGCGATGCCACCCAGGCCAGTTACAGGATCCGAGAGTCACCCAAGCTGAGCCAGGCTAACGGGACCCCAAGCATCCTGCTGGCCCCACAGAGCCTTGATGGAAGCCCTGATCCAGCCCACAGCATGGGACCTGACACCCCGGAGCCACCCGAGGCTGCACTCTCACCCATGTCCATCGACTCAGCCACCAGTGCTGACACCACGCTGGACACGACAGGGGACGTCACAGTGGAAGATGTGAAGGATTTCCTGGGCTCCTCTGAGGAGTCAGAGAAGAACCTGAGGAACCTGGCAGAAGACGAGGCCCACGCCTGTGCCATCCTGATCAAATGA
Amino sequence
MMKFRFRRQGADPQREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAPGVEFTGLHRDAATVTQMHFLTGQGRLLSLLDDSSLHLWEIVHHNGCAHLEEALSFQLPSRPGFDGASAPLSLTRVTVVLLVAASDIAALGTEGSSVFFLDVTTLTLLEGQTLAPGEVLRSVPDDYRCGKALGPVESLQGHLRDPTKILIGYSRGLLVIWNQASQCVDHIFLGNQQLESLCWGRDSSTVVSSHSDGSYAVWSVDAGSFPTLQPTVATTPYGPFPCKAINKILWRNCESGGHFIIFSGGMPRASYGDRHCVSVLRAETLVTLDFTSRIIDFFTVHSTRPEDEFDDPQALAVLLEEELVVLDLQTPGWPAVPAPYLAPLHSSAITCSAHVASVPAKLWARIVSAGEQQSPQPVSSALSWPITGGRNLAQEPSQRGLLLTGHEDGTVRFWDASGVALRPLYKLSTAGLFQTDCEHADSLAQAAEDDWPPFRKVGCFDPYSDDPRLGVQKVALCKYTAQMVVAGTAGQVLVLELSDVPVEQAVSVAIIDLLQDREGFTWKGHERLSPRTGPLPWPAGFQPRVLVQCLPPAAVTAVTLHTEWSLVAFGTSHGFGLFDYQRKSPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRAANASSKLQEANAQLAEQACPHDVEMTPVQRRIEPRSADDSLSGVVRCLYFADTFLRDGAHHGPTMWAGTNSGSVFAYALEVPAAAVGGEKRPEQAVEAVLGKEVQLMHRAPVVAIAVLDGRGRPLPEPYEASRDLAQAPDMQGGHAVLIASEEQFKVFTLPKVSAKTKFKLTAHEGCRVRKVALATFASVACEDYAETCLACLTNLGDVHVFSVPGLRPQVHYSCIRKEDISGIASCVFTRHGQGFYLISPSEFERFSLSARNITEPLCSLDINWPRDATQASYRIRESPKLSQANGTPSILLAPQSLDGSPDPAHSMGPDTPEPPEAALSPMSIDSATSADTTLDTTGDVTVEDVKDFLGSSEESEKNLRNLAEDEAHACAILIK*