ENST00000317578.7 SIX5

Information
Transcript ID
ENST00000317578.7
Genome
hg38
Position
chr19:45,764,785-45,769,252
Strand
-
CDS length
2,220
Amino acid length
740
Gene symbol
SIX5
Gene type
protein-coding
Gene description
SIX homeobox 5
Gene Entrez Gene ID
147912
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 45,764,785 45,766,111
2 45,766,350 45,767,155
1 45,768,042 45,769,252
CDS
Exon number Type Start Stop
3 CDS 45,765,501 45,766,111
2 CDS 45,766,350 45,767,155
1 CDS 45,768,042 45,768,844
Other genome
Genome Chromosome Start End Links
hg19 chr19 46,268,043 46,272,510 Link
CDS sequence
ATGGCTACCTTGCCTGCGGAGCCGAGCGCGGGGCCGGCGGCTGGGGGGGAGGCGGTGGCGGCGGCGGCGGCGACCGAAGAGGAGGAGGAGGAAGCGCGCCAGCTCTTGCAGACTTTGCAGGCGGCCGAGGGTGAGGCGGCGGCGGCGGCCGGGGCCGGGGCGGGCGCAGCGGCTGCGGGAGCTGAGGGCCCGGGATCCCCGGGCGTCCCCGGGTCGCCCCCCGAGGCCGCTTCCGAACCGCCCACGGGCCTCCGCTTCTCGCCCGAGCAGGTGGCGTGCGTCTGCGAGGCGCTGCTCCAGGCGGGCCACGCCGGCCGCTTGAGCCGCTTCCTGGGCGCACTGCCCCCGGCCGAGCGCCTACGTGGCAGCGACCCGGTGTTGCGCGCGCGGGCCCTGGTGGCCTTCCAGCGGGGCGAGTACGCCGAGCTCTACCGGCTACTCGAGAGCCGCCCCTTCCCCGCCGCCCACCACGCCTTCCTGCAGGACCTCTACCTGCGCGCGCGCTACCATGAGGCCGAGCGGGCCCGCGGCCGCGCGCTTGGCGCAGTGGACAAGTATCGACTGCGCAAGAAGTTCCCGCTGCCCAAGACCATCTGGGACGGCGAGGAGACAGTCTACTGCTTCAAGGAGCGCTCCCGCGCAGCGCTCAAGGCCTGCTACCGCGGCAACCGCTACCCCACGCCGGACGAGAAGCGCCGCCTGGCCACACTCACCGGCCTGTCGCTCACGCAGGTCAGCAACTGGTTCAAGAACCGGCGACAGCGCGACCGGACCGGGGCCGGAGGCGGCGCGCCCTGCAAGAGCGAGTCTGATGGGAATCCCACGACTGAGGACGAGTCCAGCCGAAGTCCTGAGGACCTGGAGAGAGGGGCGGCCCCAGTGTCCGCCGAGGCCGCTGCCCAGGGCTCCATATTCCTGGCAGGGACCGGCCCTCCCGCGCCTTGCCCGGCTTCCTCCTCCATCCTGGTGAACGGGAGCTTCCTGGCAGCCAGCGGCTCCCCAGCAGTGCTCCTCAACGGGGGCCCCGTCATCATCAACGGCCTGGCCCTGGGCGAGGCCTCCAGCCTGGGCCCGCTGCTGCTCACTGGGGGCGGGGGTGCCCCTCCACCGCAGCCCAGCCCTCAGGGGGCCAGCGAGACCAAGACCTCTCTGGTCCTGGACCCTCAGACAGGGGAGGTGCGGCTGGAGGAGGCTCAGTCGGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGCTGCTCCGGGACCAGCCCTTGGAGAGGAGGTCCTGGGGCCCCTGGCCCAAGTGGTGCCTGGCCCCCCGACGGCTGCCACCTTTCCTCTGCCCCCGGGGCCAGTGCCTGCTGTGGCTGCCCCACAAGTGGTACCGCTCTCCCCACCCCCGGGGTATCCCACGGGCCTGAGCCCCACCTCCCCACTATTGAACCTGCCCCAGGTAGTACCCACCTCACAGGTGGTGACCCTGCCCCAGGCTGTGGGGCCCCTGCAGCTGTTGGCAGCCGGGCCAGGCAGCCCTGTGAAGGTGGCAGCTGCAGCAGGCCCTGCCAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTCGGCCACTGCCCCAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCATCCTCACCGCCACCTTCCCCACCAGCATGCTCGTCTCCCAGGTCCTGCCGCCAGCCCCCGGCCTGGCCCTGCCACTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGGGAGGCCTCCCGGTGGCCCCCAGCCCTGCTCTCCCAGAGGCTCACGCCCTAGGCACCCTTTCTGCACAGCAGCCACCCCCCGCCGCTGCCACCACCTCCAGCACCAGCCTGCCCTTCTCCCCTGACTCCCCTGGCCTCCTGCCCAACTTCCCGGCGCCCCCACCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGAAAAGGGGCTGGGGACACAGGCCCCCCACACCGTGCTGAGGCTGCCAGACCCCGACCCTGAGGGGCTGCTCCTGGGGGCCACCGCAGGGGGTGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGA
Amino sequence
MATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVALQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEAEAKVLTQLQSVPVEEPLEL*