ENST00000317578.7 SIX5

Information
Transcript ID
ENST00000317578.7
Genome
hg19
Position
chr19:46,268,043-46,272,510
Strand
-
CDS length
2,220
Amino acid length
740
Gene symbol
SIX5
Gene type
protein-coding
Gene description
SIX homeobox 5
Gene Entrez Gene ID
147912
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 46,268,043 46,269,369
2 46,269,608 46,270,413
1 46,271,300 46,272,510
CDS
Exon number Type Start Stop
3 CDS 46,268,759 46,269,369
2 CDS 46,269,608 46,270,413
1 CDS 46,271,300 46,272,102
Other genome
Genome Chromosome Start End Links
hg38 chr19 45,764,785 45,769,252 Link
CDS sequence
ATGGCTACCTTGCCTGCGGAGCCGAGCGCGGGGCCGGCGGCTGGGGGGGAGGCGGTGGCGGCGGCGGCGGCGACCGAAGAGGAGGAGGAGGAAGCGCGCCAGCTCTTGCAGACTTTGCAGGCGGCCGAGGGTGAGGCGGCGGCGGCGGCCGGGGCCGGGGCGGGCGCAGCGGCTGCGGGAGCTGAGGGCCCGGGATCCCCGGGCGTCCCCGGGTCGCCCCCCGAGGCCGCTTCCGAACCGCCCACGGGCCTCCGCTTCTCGCCCGAGCAGGTGGCGTGCGTCTGCGAGGCGCTGCTCCAGGCGGGCCACGCCGGCCGCTTGAGCCGCTTCCTGGGCGCACTGCCCCCGGCCGAGCGCCTACGTGGCAGCGACCCGGTGTTGCGCGCGCGGGCCCTGGTGGCCTTCCAGCGGGGCGAGTACGCCGAGCTCTACCGGCTACTCGAGAGCCGCCCCTTCCCCGCCGCCCACCACGCCTTCCTGCAGGACCTCTACCTGCGCGCGCGCTACCATGAGGCCGAGCGGGCCCGCGGCCGCGCGCTTGGCGCAGTGGACAAGTATCGACTGCGCAAGAAGTTCCCGCTGCCCAAGACCATCTGGGACGGCGAGGAGACAGTCTACTGCTTCAAGGAGCGCTCCCGCGCAGCGCTCAAGGCCTGCTACCGCGGCAACCGCTACCCCACGCCGGACGAGAAGCGCCGCCTGGCCACACTCACCGGCCTGTCGCTCACGCAGGTCAGCAACTGGTTCAAGAACCGGCGACAGCGCGACCGGACCGGGGCCGGAGGCGGCGCGCCCTGCAAGAGCGAGTCTGATGGGAATCCCACGACTGAGGACGAGTCCAGCCGAAGTCCTGAGGACCTGGAGAGAGGGGCGGCCCCAGTGTCCGCCGAGGCCGCTGCCCAGGGCTCCATATTCCTGGCAGGGACCGGCCCTCCCGCGCCTTGCCCGGCTTCCTCCTCCATCCTGGTGAACGGGAGCTTCCTGGCAGCCAGCGGCTCCCCAGCAGTGCTCCTCAACGGGGGCCCCGTCATCATCAACGGCCTGGCCCTGGGCGAGGCCTCCAGCCTGGGCCCGCTGCTGCTCACTGGGGGCGGGGGTGCCCCTCCACCGCAGCCCAGCCCTCAGGGGGCCAGCGAGACCAAGACCTCTCTGGTCCTGGACCCTCAGACAGGGGAGGTGCGGCTGGAGGAGGCTCAGTCGGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGCTGCTCCGGGACCAGCCCTTGGAGAGGAGGTCCTGGGGCCCCTGGCCCAAGTGGTGCCTGGCCCCCCGACGGCTGCCACCTTTCCTCTGCCCCCGGGGCCAGTGCCTGCTGTGGCTGCCCCACAAGTGGTACCGCTCTCCCCACCCCCGGGGTATCCCACGGGCCTGAGCCCCACCTCCCCACTATTGAACCTGCCCCAGGTAGTACCCACCTCACAGGTGGTGACCCTGCCCCAGGCTGTGGGGCCCCTGCAGCTGTTGGCAGCCGGGCCAGGCAGCCCTGTGAAGGTGGCAGCTGCAGCAGGCCCTGCCAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTCGGCCACTGCCCCAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCATCCTCACCGCCACCTTCCCCACCAGCATGCTCGTCTCCCAGGTCCTGCCGCCAGCCCCCGGCCTGGCCCTGCCACTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGGGAGGCCTCCCGGTGGCCCCCAGCCCTGCTCTCCCAGAGGCTCACGCCCTAGGCACCCTTTCTGCACAGCAGCCACCCCCCGCCGCTGCCACCACCTCCAGCACCAGCCTGCCCTTCTCCCCTGACTCCCCTGGCCTCCTGCCCAACTTCCCGGCGCCCCCACCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGAAAAGGGGCTGGGGACACAGGCCCCCCACACCGTGCTGAGGCTGCCAGACCCCGACCCTGAGGGGCTGCTCCTGGGGGCCACCGCAGGGGGTGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGA
Amino sequence
MATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVALQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEAEAKVLTQLQSVPVEEPLEL*