ENST00000367500.9 SWT1

Information
Transcript ID
ENST00000367500.9
Genome
hg38
Position
chr1:185,157,167-185,291,781
Strand
+
CDS length
2,703
Amino acid length
901
Gene symbol
SWT1
Gene type
protein-coding
Gene description
SWT1 RNA endoribonuclease homolog
Gene Entrez Gene ID
54823
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 185,157,167 185,157,314
2 185,160,833 185,160,925
3 185,166,572 185,166,652
4 185,168,340 185,168,398
5 185,174,372 185,175,113
6 185,180,391 185,180,450
7 185,181,946 185,182,057
8 185,184,243 185,184,344
9 185,184,743 185,184,931
10 185,190,549 185,190,642
11 185,202,654 185,202,799
12 185,204,700 185,204,863
13 185,206,625 185,206,763
14 185,214,507 185,214,655
15 185,221,849 185,222,036
16 185,231,577 185,231,708
17 185,271,323 185,271,389
18 185,276,604 185,276,668
19 185,290,674 185,291,781
CDS
Exon number Type Start Stop
2 CDS 185,160,842 185,160,925
3 CDS 185,166,572 185,166,652
4 CDS 185,168,340 185,168,398
5 CDS 185,174,372 185,175,113
6 CDS 185,180,391 185,180,450
7 CDS 185,181,946 185,182,057
8 CDS 185,184,243 185,184,344
9 CDS 185,184,743 185,184,931
10 CDS 185,190,549 185,190,642
11 CDS 185,202,654 185,202,799
12 CDS 185,204,700 185,204,863
13 CDS 185,206,625 185,206,763
14 CDS 185,214,507 185,214,655
15 CDS 185,221,849 185,222,036
16 CDS 185,231,577 185,231,708
17 CDS 185,271,323 185,271,389
18 CDS 185,276,604 185,276,668
19 CDS 185,290,674 185,290,803
Other genome
Genome Chromosome Start End Links
hg19 chr1 185,126,299 185,260,913 Link
CDS sequence
ATGTCCAGCAAAGAATCCTGTGGGAAAAAAGAGACATCTCAGAGGAAAGACACCACCACCTCATCACCCAATTTTGGTGAAAAAGACAAGAAAGAGAGAAAAACCCCAGCAAGTTCTACTAGTTCATCTTCTATAAGATCAGTTTCATCAGAAAAGAGAAAACTGAAATCAGATCATACAGATGTTCTGTACTATAATATAAAAAGAAGACAAGGACTGAAAAGATTGAGTGTAGAAATTGACACTCTCAGAAGGAGACCAAAAATCGGTTCTTCATCCCAAAGACCTATTAAACTCAAAGAAGCATCATATTCAAATGATAATCAAATTATTTTGCAGAGTCCTTCTTCAAATGGAACTAAAAAAGACATACATAAATGTGTAGACTTTAAACCTAAAGATATCAAATTGACAAATGCTGGGAGCAAGCTTGACCATGGAATTAAAAGCCTTAGTAGTCCTAAGATTGCCAGTGATGTGAAACCTAAAGCCGAAGGCCAGGCAAGTGAAAATAAATGGTCTCATTTACTTGTTCAGAGAGAGAAGATGAAAGAACTCAAGAAAGGAAGAAACAGTAAATTTAGAGACAATTCTGAAAAATGTGTCTTAGAGAAATGGAAGAGAAATCAATTTTCTCAGGATTATAACTCCAACAAGATAATTAAGGAACCCTTGGGATCTAGAAGACAGAAGATCAGTTTCAAAATCCCTATAAAATCCCGTGACACCCTCCAGAAACTTGTAGAAGAAAATGTCTTCAACATAGATTCTAATAATTCGAAGACTAAGCAGGAAGAAAGAGAATACCTGGAAAGCTCCCAGGTTTCATTAAATGTGACTAGGCAGAAAACTGAACATTTACTTTCAGATTTTACATATAAGCGGACTGTTCATGAGTGGAAACGAAAACATCATTATGACCATCAAGAAAGTAATGATTCACATTCTAGGGAAAACCTAACCCAGAGTTTTGAAGCACCATGTTGTTCCGTGTCATCTGAAAGTATCCAGGATGCAGATCAAGAGATGCAGATAGTAGAAGAGCTTCATGCTGCACGTGTGGGAAAAAGTGTGGATTTACCTGGAGAGTTAATGAGTATGGAAATTGACTTAGAAGATGATGTACATTCCTCCTCTGCAAATAATACTTCAGACAGAAAGCTTCTAATTGTTATTGACACAAATATTCTGATGAATCATCTCAAATTTGTTAGAATTTTGAAGACAACAGAAGTACCAGGTTTTGACAAACTTGTGTTAATAATTCCCTGGGTCGTTATGCAAGAGCTAGATCGTATGAAGGAAGGAAAACTACTAAAACGTGCCCAGCACAAAGCTATACCTGCAGTTCATTTCATCAACGACAGTCTCAAAAATCAAGATAGAAAGCTATGGGGTCAGTCAATACAACTTGCATCCCAAAAACATTATGGATTGAGTGATGAGAACAATGATGATCGAGTACTAAAATGCTGTCTCCAGCACCAGGAATTATTCCCTTGTTCTTTTGTTATTCTGTGCACGGATGATAGAAACTTAAGAAACAAAGGCCTAATAAGTGGTGTGAAGTCACTCAGTAAAGAAGAATTGAGTGCAGAGTTATTACACTTATCTCTGAACACAGATGTGTGTCATCAGCCTTGTATTCCTAAGCAACAGTTGAAAGCAGAAACAACACCCTTGAAAGAGAGCTATAAGGAGGAATCTACAAATTCTGGACTGTCCATTCTGCTTGAGAGCATTGTATCTGATCTTGAAAAATCTCTTGGAACAGGTTTATCTTCAATATTAGAAACAGAAATGAAAATTGCTTTTGGAAACCTTTGGATGGAGATCCTGTACCTGAAACCACCATGGACTCTACTACATTTACTACAGTGCTTTAAAAAACATTGGTTGGCTGTATTTGGATTAGTTATGGAAAAGAACTTGCTTTTAACTATTGAGAGCCTATACAAAAATCTCCGTAAAGCTAATAAGGCAGTGGATTTTACAACAGTCAAATTCTTGCTTCAGGATTCTAGAAGTTTGTTACATGCTTTCAGTACAAGGTCAAATTATGATGGTATTCTTCCACAGACCTTTGCTCAAGTAAACAACCTCCTTCAGACATTTGCAGAGGTCAAGACAAAACTTAAGCCAAATTCTTCAGAAAACACAGTGACTAAAAAGCAGGAAGGTACTTCATTGAAGAATTCTCATAATCAAGAAATCACTGTTTTCTCGAGTTCTCATCTTCCCCAACCCAGCAGGCATCAAGAAATCTGGTCTATCCTAGAGAGTGTTTGGATTACAATATATCAGAACAGCACGGATGTATTTCAAAGATTGGGCTCAAATTCAGCTCTGACTACTTCAAATATAGCATCATTTGAAGAAGCATTTATATGTCTTCAAAAGTTAATGGCAGCTGTGAGGGATATTCTTGAAGGAATTCAAAGGATTTTGGCCCCAAACAGTAATTATCAAGATGTTGAGACCCTCTATAACTTCCTAATCAAGTATGAGGTAAATAAAAATGTCAAATTTACTGCCCAGGAAATTTATGATTGTGTTTCTCAGACTGAGTATAGGGAAAAGTTAACCATTGGATGCCGCCAGCTGGTTGAGATGGAATATACCATGCAGCAGTGCAATGCATCTGTTTATATGGAGGCCAAAAACAGGGGATGGTGTGAAGACATGCTCAACTATAGGATATAA
Amino sequence
MSSKESCGKKETSQRKDTTTSSPNFGEKDKKERKTPASSTSSSSIRSVSSEKRKLKSDHTDVLYYNIKRRQGLKRLSVEIDTLRRRPKIGSSSQRPIKLKEASYSNDNQIILQSPSSNGTKKDIHKCVDFKPKDIKLTNAGSKLDHGIKSLSSPKIASDVKPKAEGQASENKWSHLLVQREKMKELKKGRNSKFRDNSEKCVLEKWKRNQFSQDYNSNKIIKEPLGSRRQKISFKIPIKSRDTLQKLVEENVFNIDSNNSKTKQEEREYLESSQVSLNVTRQKTEHLLSDFTYKRTVHEWKRKHHYDHQESNDSHSRENLTQSFEAPCCSVSSESIQDADQEMQIVEELHAARVGKSVDLPGELMSMEIDLEDDVHSSSANNTSDRKLLIVIDTNILMNHLKFVRILKTTEVPGFDKLVLIIPWVVMQELDRMKEGKLLKRAQHKAIPAVHFINDSLKNQDRKLWGQSIQLASQKHYGLSDENNDDRVLKCCLQHQELFPCSFVILCTDDRNLRNKGLISGVKSLSKEELSAELLHLSLNTDVCHQPCIPKQQLKAETTPLKESYKEESTNSGLSILLESIVSDLEKSLGTGLSSILETEMKIAFGNLWMEILYLKPPWTLLHLLQCFKKHWLAVFGLVMEKNLLLTIESLYKNLRKANKAVDFTTVKFLLQDSRSLLHAFSTRSNYDGILPQTFAQVNNLLQTFAEVKTKLKPNSSENTVTKKQEGTSLKNSHNQEITVFSSSHLPQPSRHQEIWSILESVWITIYQNSTDVFQRLGSNSALTTSNIASFEEAFICLQKLMAAVRDILEGIQRILAPNSNYQDVETLYNFLIKYEVNKNVKFTAQEIYDCVSQTEYREKLTIGCRQLVEMEYTMQQCNASVYMEAKNRGWCEDMLNYRI*