ENST00000367500.9 SWT1

Information
Transcript ID
ENST00000367500.9
Genome
hg19
Position
chr1:185,126,299-185,260,913
Strand
+
CDS length
2,703
Amino acid length
901
Gene symbol
SWT1
Gene type
protein-coding
Gene description
SWT1 RNA endoribonuclease homolog
Gene Entrez Gene ID
54823
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 185,126,299 185,126,446
2 185,129,965 185,130,057
3 185,135,704 185,135,784
4 185,137,472 185,137,530
5 185,143,504 185,144,245
6 185,149,523 185,149,582
7 185,151,078 185,151,189
8 185,153,375 185,153,476
9 185,153,875 185,154,063
10 185,159,681 185,159,774
11 185,171,786 185,171,931
12 185,173,832 185,173,995
13 185,175,757 185,175,895
14 185,183,639 185,183,787
15 185,190,981 185,191,168
16 185,200,709 185,200,840
17 185,240,455 185,240,521
18 185,245,736 185,245,800
19 185,259,806 185,260,913
CDS
Exon number Type Start Stop
2 CDS 185,129,974 185,130,057
3 CDS 185,135,704 185,135,784
4 CDS 185,137,472 185,137,530
5 CDS 185,143,504 185,144,245
6 CDS 185,149,523 185,149,582
7 CDS 185,151,078 185,151,189
8 CDS 185,153,375 185,153,476
9 CDS 185,153,875 185,154,063
10 CDS 185,159,681 185,159,774
11 CDS 185,171,786 185,171,931
12 CDS 185,173,832 185,173,995
13 CDS 185,175,757 185,175,895
14 CDS 185,183,639 185,183,787
15 CDS 185,190,981 185,191,168
16 CDS 185,200,709 185,200,840
17 CDS 185,240,455 185,240,521
18 CDS 185,245,736 185,245,800
19 CDS 185,259,806 185,259,935
Other genome
Genome Chromosome Start End Links
hg38 chr1 185,157,167 185,291,781 Link
CDS sequence
ATGTCCAGCAAAGAATCCTGTGGGAAAAAAGAGACATCTCAGAGGAAAGACACCACCACCTCATCACCCAATTTTGGTGAAAAAGACAAGAAAGAGAGAAAAACCCCAGCAAGTTCTACTAGTTCATCTTCTATAAGATCAGTTTCATCAGAAAAGAGAAAACTGAAATCAGATCATACAGATGTTCTGTACTATAATATAAAAAGAAGACAAGGACTGAAAAGATTGAGTGTAGAAATTGACACTCTCAGAAGGAGACCAAAAATCGGTTCTTCATCCCAAAGACCTATTAAACTCAAAGAAGCATCATATTCAAATGATAATCAAATTATTTTGCAGAGTCCTTCTTCAAATGGAACTAAAAAAGACATACATAAATGTGTAGACTTTAAACCTAAAGATATCAAATTGACAAATGCTGGGAGCAAGCTTGACCATGGAATTAAAAGCCTTAGTAGTCCTAAGATTGCCAGTGATGTGAAACCTAAAGCCGAAGGCCAGGCAAGTGAAAATAAATGGTCTCATTTACTTGTTCAGAGAGAGAAGATGAAAGAACTCAAGAAAGGAAGAAACAGTAAATTTAGAGACAATTCTGAAAAATGTGTCTTAGAGAAATGGAAGAGAAATCAATTTTCTCAGGATTATAACTCCAACAAGATAATTAAGGAACCCTTGGGATCTAGAAGACAGAAGATCAGTTTCAAAATCCCTATAAAATCCCGTGACACCCTCCAGAAACTTGTAGAAGAAAATGTCTTCAACATAGATTCTAATAATTCGAAGACTAAGCAGGAAGAAAGAGAATACCTGGAAAGCTCCCAGGTTTCATTAAATGTGACTAGGCAGAAAACTGAACATTTACTTTCAGATTTTACATATAAGCGGACTGTTCATGAGTGGAAACGAAAACATCATTATGACCATCAAGAAAGTAATGATTCACATTCTAGGGAAAACCTAACCCAGAGTTTTGAAGCACCATGTTGTTCCGTGTCATCTGAAAGTATCCAGGATGCAGATCAAGAGATGCAGATAGTAGAAGAGCTTCATGCTGCACGTGTGGGAAAAAGTGTGGATTTACCTGGAGAGTTAATGAGTATGGAAATTGACTTAGAAGATGATGTACATTCCTCCTCTGCAAATAATACTTCAGACAGAAAGCTTCTAATTGTTATTGACACAAATATTCTGATGAATCATCTCAAATTTGTTAGAATTTTGAAGACAACAGAAGTACCAGGTTTTGACAAACTTGTGTTAATAATTCCCTGGGTCGTTATGCAAGAGCTAGATCGTATGAAGGAAGGAAAACTACTAAAACGTGCCCAGCACAAAGCTATACCTGCAGTTCATTTCATCAACGACAGTCTCAAAAATCAAGATAGAAAGCTATGGGGTCAGTCAATACAACTTGCATCCCAAAAACATTATGGATTGAGTGATGAGAACAATGATGATCGAGTACTAAAATGCTGTCTCCAGCACCAGGAATTATTCCCTTGTTCTTTTGTTATTCTGTGCACGGATGATAGAAACTTAAGAAACAAAGGCCTAATAAGTGGTGTGAAGTCACTCAGTAAAGAAGAATTGAGTGCAGAGTTATTACACTTATCTCTGAACACAGATGTGTGTCATCAGCCTTGTATTCCTAAGCAACAGTTGAAAGCAGAAACAACACCCTTGAAAGAGAGCTATAAGGAGGAATCTACAAATTCTGGACTGTCCATTCTGCTTGAGAGCATTGTATCTGATCTTGAAAAATCTCTTGGAACAGGTTTATCTTCAATATTAGAAACAGAAATGAAAATTGCTTTTGGAAACCTTTGGATGGAGATCCTGTACCTGAAACCACCATGGACTCTACTACATTTACTACAGTGCTTTAAAAAACATTGGTTGGCTGTATTTGGATTAGTTATGGAAAAGAACTTGCTTTTAACTATTGAGAGCCTATACAAAAATCTCCGTAAAGCTAATAAGGCAGTGGATTTTACAACAGTCAAATTCTTGCTTCAGGATTCTAGAAGTTTGTTACATGCTTTCAGTACAAGGTCAAATTATGATGGTATTCTTCCACAGACCTTTGCTCAAGTAAACAACCTCCTTCAGACATTTGCAGAGGTCAAGACAAAACTTAAGCCAAATTCTTCAGAAAACACAGTGACTAAAAAGCAGGAAGGTACTTCATTGAAGAATTCTCATAATCAAGAAATCACTGTTTTCTCGAGTTCTCATCTTCCCCAACCCAGCAGGCATCAAGAAATCTGGTCTATCCTAGAGAGTGTTTGGATTACAATATATCAGAACAGCACGGATGTATTTCAAAGATTGGGCTCAAATTCAGCTCTGACTACTTCAAATATAGCATCATTTGAAGAAGCATTTATATGTCTTCAAAAGTTAATGGCAGCTGTGAGGGATATTCTTGAAGGAATTCAAAGGATTTTGGCCCCAAACAGTAATTATCAAGATGTTGAGACCCTCTATAACTTCCTAATCAAGTATGAGGTAAATAAAAATGTCAAATTTACTGCCCAGGAAATTTATGATTGTGTTTCTCAGACTGAGTATAGGGAAAAGTTAACCATTGGATGCCGCCAGCTGGTTGAGATGGAATATACCATGCAGCAGTGCAATGCATCTGTTTATATGGAGGCCAAAAACAGGGGATGGTGTGAAGACATGCTCAACTATAGGATATAA
Amino sequence
MSSKESCGKKETSQRKDTTTSSPNFGEKDKKERKTPASSTSSSSIRSVSSEKRKLKSDHTDVLYYNIKRRQGLKRLSVEIDTLRRRPKIGSSSQRPIKLKEASYSNDNQIILQSPSSNGTKKDIHKCVDFKPKDIKLTNAGSKLDHGIKSLSSPKIASDVKPKAEGQASENKWSHLLVQREKMKELKKGRNSKFRDNSEKCVLEKWKRNQFSQDYNSNKIIKEPLGSRRQKISFKIPIKSRDTLQKLVEENVFNIDSNNSKTKQEEREYLESSQVSLNVTRQKTEHLLSDFTYKRTVHEWKRKHHYDHQESNDSHSRENLTQSFEAPCCSVSSESIQDADQEMQIVEELHAARVGKSVDLPGELMSMEIDLEDDVHSSSANNTSDRKLLIVIDTNILMNHLKFVRILKTTEVPGFDKLVLIIPWVVMQELDRMKEGKLLKRAQHKAIPAVHFINDSLKNQDRKLWGQSIQLASQKHYGLSDENNDDRVLKCCLQHQELFPCSFVILCTDDRNLRNKGLISGVKSLSKEELSAELLHLSLNTDVCHQPCIPKQQLKAETTPLKESYKEESTNSGLSILLESIVSDLEKSLGTGLSSILETEMKIAFGNLWMEILYLKPPWTLLHLLQCFKKHWLAVFGLVMEKNLLLTIESLYKNLRKANKAVDFTTVKFLLQDSRSLLHAFSTRSNYDGILPQTFAQVNNLLQTFAEVKTKLKPNSSENTVTKKQEGTSLKNSHNQEITVFSSSHLPQPSRHQEIWSILESVWITIYQNSTDVFQRLGSNSALTTSNIASFEEAFICLQKLMAAVRDILEGIQRILAPNSNYQDVETLYNFLIKYEVNKNVKFTAQEIYDCVSQTEYREKLTIGCRQLVEMEYTMQQCNASVYMEAKNRGWCEDMLNYRI*