ENST00000379055.5 TPT1

Information
Transcript ID
ENST00000379055.5
Genome
hg38
Position
chr13:45,337,302-45,341,158
Strand
-
CDS length
417
Amino acid length
139
Gene symbol
TPT1
Gene type
protein-coding
Gene description
tumor protein, translationally-controlled 1
Gene Entrez Gene ID
7178
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 45,337,302 45,337,388
4 45,338,660 45,338,776
3 45,339,497 45,339,602
2 45,339,994 45,340,184
1 45,340,712 45,341,158
CDS
Exon number Type Start Stop
5 CDS 45,337,386 45,337,388
4 CDS 45,338,660 45,338,776
3 CDS 45,339,497 45,339,602
2 CDS 45,339,994 45,340,184
Other genome
Genome Chromosome Start End Links
hg19 chr13 45,911,437 45,915,293 Link
CDS sequence
ATGGTCAGTAGGACAGAAGGTAACATTGATGACTCGCTCATTGGTGGAAATGCCTCCGCTGAAGGCCCCGAGGGCGAAGGTACCGAAAGCACAGTAATCACTGGTGTCGATATTGTCATGAACCATCACCTGCAGGAAACAAGTTTCACAAAAGAAGCCTACAAGAAGTACATCAAAGATTACATGAAATCAATCAAAGGGAAACTTGAAGAACAGAGACCAGAAAGAGTAAAACCTTTTATGACAGGGGCTGCAGAACAAATCAAGCACATCCTTGCTAATTTCAAAAACTACCAGTTCTTTATTGGTGAAAACATGAATCCAGATGGCATGGTTGCTCTATTGGACTACCGTGAGGATGGTGTGACCCCATATATGATTTTCTTTAAGGATGGTTTAGAAATGGAAAAATGTTAA
Amino sequence
MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC*