ENST00000379055.5 TPT1

Information
Transcript ID
ENST00000379055.5
Genome
hg19
Position
chr13:45,911,437-45,915,293
Strand
-
CDS length
417
Amino acid length
139
Gene symbol
TPT1
Gene type
protein-coding
Gene description
tumor protein, translationally-controlled 1
Gene Entrez Gene ID
7178
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 45,911,437 45,911,523
4 45,912,795 45,912,911
3 45,913,632 45,913,737
2 45,914,129 45,914,319
1 45,914,847 45,915,293
CDS
Exon number Type Start Stop
5 CDS 45,911,521 45,911,523
4 CDS 45,912,795 45,912,911
3 CDS 45,913,632 45,913,737
2 CDS 45,914,129 45,914,319
Other genome
Genome Chromosome Start End Links
hg38 chr13 45,337,302 45,341,158 Link
CDS sequence
ATGGTCAGTAGGACAGAAGGTAACATTGATGACTCGCTCATTGGTGGAAATGCCTCCGCTGAAGGCCCCGAGGGCGAAGGTACCGAAAGCACAGTAATCACTGGTGTCGATATTGTCATGAACCATCACCTGCAGGAAACAAGTTTCACAAAAGAAGCCTACAAGAAGTACATCAAAGATTACATGAAATCAATCAAAGGGAAACTTGAAGAACAGAGACCAGAAAGAGTAAAACCTTTTATGACAGGGGCTGCAGAACAAATCAAGCACATCCTTGCTAATTTCAAAAACTACCAGTTCTTTATTGGTGAAAACATGAATCCAGATGGCATGGTTGCTCTATTGGACTACCGTGAGGATGGTGTGACCCCATATATGATTTTCTTTAAGGATGGTTTAGAAATGGAAAAATGTTAA
Amino sequence
MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC*