ENST00000417545.5 TRIM48

Information
Transcript ID
ENST00000417545.5
Genome
hg38
Position
chr11:55,262,155-55,271,114
Strand
+
CDS length
675
Amino acid length
225
Gene symbol
TRIM48
Gene type
protein-coding
Gene description
tripartite motif containing 48
Gene Entrez Gene ID
79097
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 55,262,155 55,262,311
2 55,264,900 55,265,314
3 55,265,600 55,265,695
4 55,268,350 55,268,372
5 55,269,242 55,269,339
6 55,270,437 55,271,114
CDS
Exon number Type Start Stop
1 CDS 55,262,268 55,262,311
2 CDS 55,264,900 55,265,314
3 CDS 55,265,600 55,265,695
4 CDS 55,268,350 55,268,372
5 CDS 55,269,242 55,269,338
Other genome
Genome Chromosome Start End Links
hg19 chr11 55,029,631 55,038,590 Link
CDS sequence
ATGTCTCGAAGAATCATTGTGGGAACCCTTCAAAGAACCCAGCGAAACATGAATTCTGGAATCTCGCAAGTCTTCCAGAGGGAACTCACCTGCCCCATCTGCATGAACTACTTCATAGACCCGGTCACCATAGACTGTGGGCACAGCTTTTGCAGGCCCTGTTTCTACCTCAACTGGCAAGACATCCCAATTCTTACTCAGTGCTTTGAATGCATAAAGACAATACAGCAGAGAAACCTCAAAACTAACATTCGATTGAAGAAGATGGCTTCCCTTGCCAGAAAAGCCAGTCTCTGGCTATTCCTGAGCTCTGAGGAGCAAATGTGTGGCATTCACAGGGAGACAAAGAAGATGTTCTGTGAAGTGGACAGGAGCCTGCTCTGTTTGCTGTGCTCCAGCTCTCAGGAGCACCGGTATCACAGACACTGTCCCGCTGAGTGGGCTGCTGAGGAACACTGGGAGAAGCTTTTAAAGAAAATGCAGTCTTTATGGGAAAAAGCTTGTGAAAATCAGAGAAACCTGAATGTGGAAACCACCAGAATCAGCCACTGGAAGGCTTTTGGAGACATATTATACAGGAGTGAGTCCGTGCTGCTGCACATGCCCCAGCCTCTGAATCTAGCGCTCAGGGCAGGGCCCATCACTGGACTGAGGGACAGGCTCAACCAATTCTGA
Amino sequence
MSRRIIVGTLQRTQRNMNSGISQVFQRELTCPICMNYFIDPVTIDCGHSFCRPCFYLNWQDIPILTQCFECIKTIQQRNLKTNIRLKKMASLARKASLWLFLSSEEQMCGIHRETKKMFCEVDRSLLCLLCSSSQEHRYHRHCPAEWAAEEHWEKLLKKMQSLWEKACENQRNLNVETTRISHWKAFGDILYRSESVLLHMPQPLNLALRAGPITGLRDRLNQF*