ENST00000417545.5 TRIM48

Information
Transcript ID
ENST00000417545.5
Genome
hg19
Position
chr11:55,029,631-55,038,590
Strand
+
CDS length
675
Amino acid length
225
Gene symbol
TRIM48
Gene type
protein-coding
Gene description
tripartite motif containing 48
Gene Entrez Gene ID
79097
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 55,029,631 55,029,787
2 55,032,376 55,032,790
3 55,033,076 55,033,171
4 55,035,826 55,035,848
5 55,036,718 55,036,815
6 55,037,913 55,038,590
CDS
Exon number Type Start Stop
1 CDS 55,029,744 55,029,787
2 CDS 55,032,376 55,032,790
3 CDS 55,033,076 55,033,171
4 CDS 55,035,826 55,035,848
5 CDS 55,036,718 55,036,814
Other genome
Genome Chromosome Start End Links
hg38 chr11 55,262,155 55,271,114 Link
CDS sequence
ATGTCTCGAAGAATCATTGTGGGAACCCTTCAAAGAACCCAGCGAAACATGAATTCTGGAATCTCGCAAGTCTTCCAGAGGGAACTCACCTGCCCCATCTGCATGAACTACTTCATAGACCCGGTCACCATAGACTGTGGGCACAGCTTTTGCAGGCCCTGTTTCTACCTCAACTGGCAAGACATCCCAATTCTTACTCAGTGCTTTGAATGCATAAAGACAATACAGCAGAGAAACCTCAAAACTAACATTCGATTGAAGAAGATGGCTTCCCTTGCCAGAAAAGCCAGTCTCTGGCTATTCCTGAGCTCTGAGGAGCAAATGTGTGGCATTCACAGGGAGACAAAGAAGATGTTCTGTGAAGTGGACAGGAGCCTGCTCTGTTTGCTGTGCTCCAGCTCTCAGGAGCACCGGTATCACAGACACTGTCCCGCTGAGTGGGCTGCTGAGGAACACTGGGAGAAGCTTTTAAAGAAAATGCAGTCTTTATGGGAAAAAGCTTGTGAAAATCAGAGAAACCTGAATGTGGAAACCACCAGAATCAGCCACTGGAAGGCTTTTGGAGACATATTATACAGGAGTGAGTCCGTGCTGCTGCACATGCCCCAGCCTCTGAATCTAGCGCTCAGGGCAGGGCCCATCACTGGACTGAGGGACAGGCTCAACCAATTCTGA
Amino sequence
MSRRIIVGTLQRTQRNMNSGISQVFQRELTCPICMNYFIDPVTIDCGHSFCRPCFYLNWQDIPILTQCFECIKTIQQRNLKTNIRLKKMASLARKASLWLFLSSEEQMCGIHRETKKMFCEVDRSLLCLLCSSSQEHRYHRHCPAEWAAEEHWEKLLKKMQSLWEKACENQRNLNVETTRISHWKAFGDILYRSESVLLHMPQPLNLALRAGPITGLRDRLNQF*