ENST00000580223.2 OTOP2
Information
- Transcript ID
- ENST00000580223.2
- Genome
- hg38
- Position
- chr17:74,922,950-74,933,912
- Strand
- +
- CDS length
- 621
- Amino acid length
- 207
- Gene symbol
- OTOP2
- Gene type
- protein-coding
- Gene description
- otopetrin 2
- Gene Entrez Gene ID
- 92736
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 74,922,950 | 74,923,034 |
| 2 | 74,924,137 | 74,924,333 |
| 3 | 74,924,600 | 74,924,945 |
| 4 | 74,925,556 | 74,925,692 |
| 5 | 74,933,375 | 74,933,912 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 74,924,633 | 74,924,945 |
| 4 | CDS | 74,925,556 | 74,925,692 |
| 5 | CDS | 74,933,375 | 74,933,545 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 72,919,045 | 72,930,007 | Link |
CDS sequence
ATGTCCGAGGAGCTGGCCCAGGGCCCCAAGGAGAGCCCCCCGGCGCCGCGTGCGGGCCCCAGGGAGGTGTGGAAGAAGGGTGGCCGCCTGCTGTCGGTGCTGCTGGCGGTGAACGTGCTGCTCCTCGCCTGCACGCTCATCAGCGGCGGAGCCTTCAACAAGGTGGCCGTGTACGACACCGACGTGTTCGCGCTGCTCACTGCGATGATGCTGCTGGCAACGCTCTGGATCCTCTTCTACCTCCTCCGAACCGTGCGCTGCCCCTGCGCGGTACCCTACCGGGACGCGCACGCTGGCCCCATCTGGCTCCGAGGTGGGCTGGTGCTGTTTGGAATCTGCACCCTCATCATGGATGTCTTCAAGACCGGCTACTACTCCAGTTTCTTTGAGTGCCAGTCAGCCATCAAGATCCTGCACCCCCTCATCCAGGCTGTGTTTGTCATCATCCAGCTGTGGATCATGCCTGCCTTCGGGGCCCGCCCTCATTTCAGCAACACAGTGGAGGTGGATTTCTACGGCTACTCCCTCTGGGCGGTCATCGTCAACATCTGCCTCCCTTTCGGCATCTTCTACCGCATGCACGCTGTGTCCAGCCTGCTGGAGGTCTACGTGCTGTCCTGA
Amino sequence
MSEELAQGPKESPPAPRAGPREVWKKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDTDVFALLTAMMLLATLWILFYLLRTVRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVFKTGYYSSFFECQSAIKILHPLIQAVFVIIQLWIMPAFGARPHFSNTVEVDFYGYSLWAVIVNICLPFGIFYRMHAVSSLLEVYVLS*