ENST00000580223.2 OTOP2

Information
Transcript ID
ENST00000580223.2
Genome
hg19
Position
chr17:72,919,045-72,930,007
Strand
+
CDS length
621
Amino acid length
207
Gene symbol
OTOP2
Gene type
protein-coding
Gene description
otopetrin 2
Gene Entrez Gene ID
92736
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 72,919,045 72,919,129
2 72,920,232 72,920,428
3 72,920,695 72,921,040
4 72,921,651 72,921,787
5 72,929,470 72,930,007
CDS
Exon number Type Start Stop
3 CDS 72,920,728 72,921,040
4 CDS 72,921,651 72,921,787
5 CDS 72,929,470 72,929,640
Other genome
Genome Chromosome Start End Links
hg38 chr17 74,922,950 74,933,912 Link
CDS sequence
ATGTCCGAGGAGCTGGCCCAGGGCCCCAAGGAGAGCCCCCCGGCGCCGCGTGCGGGCCCCAGGGAGGTGTGGAAGAAGGGTGGCCGCCTGCTGTCGGTGCTGCTGGCGGTGAACGTGCTGCTCCTCGCCTGCACGCTCATCAGCGGCGGAGCCTTCAACAAGGTGGCCGTGTACGACACCGACGTGTTCGCGCTGCTCACTGCGATGATGCTGCTGGCAACGCTCTGGATCCTCTTCTACCTCCTCCGAACCGTGCGCTGCCCCTGCGCGGTACCCTACCGGGACGCGCACGCTGGCCCCATCTGGCTCCGAGGTGGGCTGGTGCTGTTTGGAATCTGCACCCTCATCATGGATGTCTTCAAGACCGGCTACTACTCCAGTTTCTTTGAGTGCCAGTCAGCCATCAAGATCCTGCACCCCCTCATCCAGGCTGTGTTTGTCATCATCCAGCTGTGGATCATGCCTGCCTTCGGGGCCCGCCCTCATTTCAGCAACACAGTGGAGGTGGATTTCTACGGCTACTCCCTCTGGGCGGTCATCGTCAACATCTGCCTCCCTTTCGGCATCTTCTACCGCATGCACGCTGTGTCCAGCCTGCTGGAGGTCTACGTGCTGTCCTGA
Amino sequence
MSEELAQGPKESPPAPRAGPREVWKKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDTDVFALLTAMMLLATLWILFYLLRTVRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVFKTGYYSSFFECQSAIKILHPLIQAVFVIIQLWIMPAFGARPHFSNTVEVDFYGYSLWAVIVNICLPFGIFYRMHAVSSLLEVYVLS*