ENST00000470347.1 SYPL1

Information
Transcript ID
ENST00000470347.1
Genome
hg38
Position
chr7:106,091,457-106,112,221
Strand
-
CDS length
675
Amino acid length
225
Gene symbol
SYPL1
Gene type
protein-coding
Gene description
synaptophysin like 1
Gene Entrez Gene ID
6856
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 106,091,457 106,091,939
5 106,092,564 106,092,669
4 106,092,949 106,093,137
3 106,097,690 106,097,897
2 106,099,158 106,099,282
1 106,112,140 106,112,221
CDS
Exon number Type Start Stop
5 CDS 106,092,586 106,092,669
4 CDS 106,092,949 106,093,137
3 CDS 106,097,690 106,097,897
2 CDS 106,099,158 106,099,282
1 CDS 106,112,140 106,112,208
Other genome
Genome Chromosome Start End Links
hg19 chr7 105,731,903 105,752,667 Link
CDS sequence
ATGTCCGGCTTCCAGATCAACCTCAACCCGCTCAAGGAGCCACTCGGCTTCATCAAGGTCCTCGAGTGGATTGCTTCTATCTTTGCTTTTGCCACCTGTGGAGGTTTTAAGGGCCAAACAGAAATTCAAGTGAATTGTCCTCCTGCAGTTACTGAGAATAAAACTGTTACAGCTACTTTTGGTTATCCATTCAGGTTGAATGAGGCATCATTTCAGCCACCTCCAGGTGTAAACATATGTGATGTAAATTGGAAAGATTACGTCCTCATAGGCGATTACTCTTCTTCTGCACAATTCTATGTTACCTTTGCAGTCTTTGTGTTCCTGTACTGCATTGCTGCCCTTCTGCTTTATGTTGGCTACACGAGTCTGTATCTGGATAGTCGTAAACTTCCTATGATAGACTTTGTTGTTACACTTGTTGCCACTTTTTTGTGGTTGGTGAGCACTTCAGCCTGGGCTAAAGCTCTGACAGATATTAAAATAGCTACTGGTCACAATATTATTGATGAACTTCCGCCTTGTAAGAAGAAAGCAGTACTGTGTTACTTTGGCTCTGTGACCAGTATGGGATCCCTAAATGTATCTGTGATGGAGTTTCGCTATGTCGCTCAGACTGGAGTGCAGTGGCATGATCTCGGCACACTGCAACCTCCGCCTCCTGGGTTCAAGTGA
Amino sequence
MSGFQINLNPLKEPLGFIKVLEWIASIFAFATCGGFKGQTEIQVNCPPAVTENKTVTATFGYPFRLNEASFQPPPGVNICDVNWKDYVLIGDYSSSAQFYVTFAVFVFLYCIAALLLYVGYTSLYLDSRKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIATGHNIIDELPPCKKKAVLCYFGSVTSMGSLNVSVMEFRYVAQTGVQWHDLGTLQPPPPGFK*