ENST00000470347.1 SYPL1

Information
Transcript ID
ENST00000470347.1
Genome
hg19
Position
chr7:105,731,903-105,752,667
Strand
-
CDS length
675
Amino acid length
225
Gene symbol
SYPL1
Gene type
protein-coding
Gene description
synaptophysin like 1
Gene Entrez Gene ID
6856
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 105,731,903 105,732,385
5 105,733,010 105,733,115
4 105,733,395 105,733,583
3 105,738,136 105,738,343
2 105,739,604 105,739,728
1 105,752,586 105,752,667
CDS
Exon number Type Start Stop
5 CDS 105,733,032 105,733,115
4 CDS 105,733,395 105,733,583
3 CDS 105,738,136 105,738,343
2 CDS 105,739,604 105,739,728
1 CDS 105,752,586 105,752,654
Other genome
Genome Chromosome Start End Links
hg38 chr7 106,091,457 106,112,221 Link
CDS sequence
ATGTCCGGCTTCCAGATCAACCTCAACCCGCTCAAGGAGCCACTCGGCTTCATCAAGGTCCTCGAGTGGATTGCTTCTATCTTTGCTTTTGCCACCTGTGGAGGTTTTAAGGGCCAAACAGAAATTCAAGTGAATTGTCCTCCTGCAGTTACTGAGAATAAAACTGTTACAGCTACTTTTGGTTATCCATTCAGGTTGAATGAGGCATCATTTCAGCCACCTCCAGGTGTAAACATATGTGATGTAAATTGGAAAGATTACGTCCTCATAGGCGATTACTCTTCTTCTGCACAATTCTATGTTACCTTTGCAGTCTTTGTGTTCCTGTACTGCATTGCTGCCCTTCTGCTTTATGTTGGCTACACGAGTCTGTATCTGGATAGTCGTAAACTTCCTATGATAGACTTTGTTGTTACACTTGTTGCCACTTTTTTGTGGTTGGTGAGCACTTCAGCCTGGGCTAAAGCTCTGACAGATATTAAAATAGCTACTGGTCACAATATTATTGATGAACTTCCGCCTTGTAAGAAGAAAGCAGTACTGTGTTACTTTGGCTCTGTGACCAGTATGGGATCCCTAAATGTATCTGTGATGGAGTTTCGCTATGTCGCTCAGACTGGAGTGCAGTGGCATGATCTCGGCACACTGCAACCTCCGCCTCCTGGGTTCAAGTGA
Amino sequence
MSGFQINLNPLKEPLGFIKVLEWIASIFAFATCGGFKGQTEIQVNCPPAVTENKTVTATFGYPFRLNEASFQPPPGVNICDVNWKDYVLIGDYSSSAQFYVTFAVFVFLYCIAALLLYVGYTSLYLDSRKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIATGHNIIDELPPCKKKAVLCYFGSVTSMGSLNVSVMEFRYVAQTGVQWHDLGTLQPPPPGFK*