ENST00000404876.1 TCF20

Information
Transcript ID
ENST00000404876.1
Genome
hg38
Position
chr22:42,161,098-42,210,208
Strand
-
CDS length
753
Amino acid length
251
Gene symbol
TCF20
Gene type
protein-coding
Gene description
transcription factor 20
Gene Entrez Gene ID
6942
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 42,161,098 42,161,358
4 42,168,609 42,168,703
3 42,169,847 42,169,896
2 42,179,609 42,179,702
1 42,209,651 42,210,208
CDS
Exon number Type Start Stop
4 CDS 42,168,653 42,168,703
3 CDS 42,169,847 42,169,896
2 CDS 42,179,609 42,179,702
1 CDS 42,209,651 42,210,208
Other genome
Genome Chromosome Start End Links
hg19 chr22 42,557,104 42,606,214 Link
CDS sequence
ATGGGGCACCTGGTTTGCTGTCTGTGTGGCAAGTGGGCCAGTTACCGGAACATGGGTGACCTCTTTGGACCTTTTTATCCCCAAGATTATGCAGCCACTCTCCCGAAGAATCCACCTCCTAAGAGGGCCACAGAAATGCAGAGCAAAGTTAAGGTACGGCACAAAAGTGCTTCTAATGGCTCCAAGACGGACACTGAGGAGGAGGAAGAGCAGCAGCAGCAGCAGAAGGAGCAGAGAAGCCTGGCCGCACACCCCAGGTTTAAGCGGCGCCACCGCTCGGAAGACTGTGGTGGAGGCCCTCGGTCCCTGTCCAGGGGGCTCCCTTGTAAAAAAGCAGCCACTGAGGGCAGCAGTGAAAAGACTGTTTTGGACTCGAAGCCCTCCGTGCCCACCACTTCAGAAGGTGGCCCTGAGCTGGAGTTACAAATCCCTGAACTACCTCTTGACAGCAATGAATTTTGGGTCCATGAGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGGTTTGTGGCAGGCTCTATGGCCTGCAGGAAGCGCTGGAAATAGCCAGAGAGATGAAATGTTCCCACTGCCAGGAGGCAGGCGCCACCTTGGGCTGCTACAACAAAGGCTGCTCCTTCCGATACCATTACCCGTGTGCCATTGATGCAGATTGTTTGCTACATGAGGAGAACTTCTCGGTGAGGTGCCCTAAGCACAAGAACAAGACCGCGAAAGGCAGCCTCAGCACAGAGCAGTCGGAGCGGGGGTGA
Amino sequence
MGHLVCCLCGKWASYRNMGDLFGPFYPQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGSKTDTEEEEEQQQQQKEQRSLAAHPRFKRRHRSEDCGGGPRSLSRGLPCKKAATEGSSEKTVLDSKPSVPTTSEGGPELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCAIDADCLLHEENFSVRCPKHKNKTAKGSLSTEQSERG*