ENST00000404876.1 TCF20

Information
Transcript ID
ENST00000404876.1
Genome
hg19
Position
chr22:42,557,104-42,606,214
Strand
-
CDS length
753
Amino acid length
251
Gene symbol
TCF20
Gene type
protein-coding
Gene description
transcription factor 20
Gene Entrez Gene ID
6942
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 42,557,104 42,557,364
4 42,564,615 42,564,709
3 42,565,853 42,565,902
2 42,575,615 42,575,708
1 42,605,657 42,606,214
CDS
Exon number Type Start Stop
4 CDS 42,564,659 42,564,709
3 CDS 42,565,853 42,565,902
2 CDS 42,575,615 42,575,708
1 CDS 42,605,657 42,606,214
Other genome
Genome Chromosome Start End Links
hg38 chr22 42,161,098 42,210,208 Link
CDS sequence
ATGGGGCACCTGGTTTGCTGTCTGTGTGGCAAGTGGGCCAGTTACCGGAACATGGGTGACCTCTTTGGACCTTTTTATCCCCAAGATTATGCAGCCACTCTCCCGAAGAATCCACCTCCTAAGAGGGCCACAGAAATGCAGAGCAAAGTTAAGGTACGGCACAAAAGTGCTTCTAATGGCTCCAAGACGGACACTGAGGAGGAGGAAGAGCAGCAGCAGCAGCAGAAGGAGCAGAGAAGCCTGGCCGCACACCCCAGGTTTAAGCGGCGCCACCGCTCGGAAGACTGTGGTGGAGGCCCTCGGTCCCTGTCCAGGGGGCTCCCTTGTAAAAAAGCAGCCACTGAGGGCAGCAGTGAAAAGACTGTTTTGGACTCGAAGCCCTCCGTGCCCACCACTTCAGAAGGTGGCCCTGAGCTGGAGTTACAAATCCCTGAACTACCTCTTGACAGCAATGAATTTTGGGTCCATGAGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGGTTTGTGGCAGGCTCTATGGCCTGCAGGAAGCGCTGGAAATAGCCAGAGAGATGAAATGTTCCCACTGCCAGGAGGCAGGCGCCACCTTGGGCTGCTACAACAAAGGCTGCTCCTTCCGATACCATTACCCGTGTGCCATTGATGCAGATTGTTTGCTACATGAGGAGAACTTCTCGGTGAGGTGCCCTAAGCACAAGAACAAGACCGCGAAAGGCAGCCTCAGCACAGAGCAGTCGGAGCGGGGGTGA
Amino sequence
MGHLVCCLCGKWASYRNMGDLFGPFYPQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGSKTDTEEEEEQQQQQKEQRSLAAHPRFKRRHRSEDCGGGPRSLSRGLPCKKAATEGSSEKTVLDSKPSVPTTSEGGPELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCAIDADCLLHEENFSVRCPKHKNKTAKGSLSTEQSERG*