ENST00000356786.10 CCDC88B

Information
Transcript ID
ENST00000356786.10
Genome
hg38
Position
chr11:64,340,204-64,357,534
Strand
+
CDS length
4,431
Amino acid length
1,477
Gene symbol
CCDC88B
Gene type
protein-coding
Gene description
coiled-coil domain containing 88B
Gene Entrez Gene ID
283234
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 64,340,204 64,340,326
2 64,340,607 64,340,752
3 64,340,907 64,341,018
4 64,341,109 64,341,178
5 64,341,270 64,341,328
6 64,341,421 64,341,504
7 64,341,599 64,341,742
8 64,341,994 64,342,139
9 64,342,294 64,342,375
10 64,342,522 64,342,680
11 64,343,179 64,343,325
12 64,343,507 64,343,615
13 64,343,778 64,343,914
14 64,343,997 64,345,157
15 64,349,331 64,349,458
16 64,349,551 64,349,668
17 64,351,160 64,351,255
18 64,351,476 64,351,616
19 64,352,130 64,352,386
20 64,352,744 64,352,887
21 64,353,054 64,353,240
22 64,353,351 64,353,496
23 64,353,715 64,353,813
24 64,354,004 64,354,170
25 64,355,194 64,355,400
26 64,355,560 64,355,628
27 64,357,039 64,357,534
CDS
Exon number Type Start Stop
1 CDS 64,340,267 64,340,326
2 CDS 64,340,607 64,340,752
3 CDS 64,340,907 64,341,018
4 CDS 64,341,109 64,341,178
5 CDS 64,341,270 64,341,328
6 CDS 64,341,421 64,341,504
7 CDS 64,341,599 64,341,742
8 CDS 64,341,994 64,342,139
9 CDS 64,342,294 64,342,375
10 CDS 64,342,522 64,342,680
11 CDS 64,343,179 64,343,325
12 CDS 64,343,507 64,343,615
13 CDS 64,343,778 64,343,914
14 CDS 64,343,997 64,345,157
15 CDS 64,349,331 64,349,458
16 CDS 64,349,551 64,349,668
17 CDS 64,351,160 64,351,255
18 CDS 64,351,476 64,351,616
19 CDS 64,352,130 64,352,386
20 CDS 64,352,744 64,352,887
21 CDS 64,353,054 64,353,240
22 CDS 64,353,351 64,353,496
23 CDS 64,353,715 64,353,813
24 CDS 64,354,004 64,354,170
25 CDS 64,355,194 64,355,400
26 CDS 64,355,560 64,355,628
27 CDS 64,357,039 64,357,094
Other genome
Genome Chromosome Start End Links
hg19 chr11 64,107,676 64,125,006 Link
CDS sequence
ATGGAGGGGGGCAAGGGGCCCAGGCTCAGAGACTTCCTGAGTGGGAGTCTGGCTACCTGGGCGCTGGGACTGGCCGGGCTGGTCGGGGAGGCGGAGGACTCGGAGGGGGAAGAAGAGGAAGAGGAGGAAGAGCCGCCCCTTTGGTTGGAGAAGAGATTCCTGCGCCTCAGCGATGGGGCCCTGCTCCTCCGGGTGCTGGGCATCATTGCCCCCAGCTCCCGAGGGGGACCTCGGATGCTCAGAGGCCTTGACGGACCTGCTGCCTGGCGAGTGTGGAACCTGAACCACCTGTGGGGCCGACTGAGGGACTTCTACCAGGAGGAGCTGCAGCTGCTGATCCTGTCGCCACCCCCAGACCTCCAGACATTGGGATTTGACCCTCTCTCAGAAGAAGCGGTGGAGCAGCTGGAAGGCGTTCTTCGGCTACTGTTGGGAGCGTCAGTACAGTGTGAGCACCGGGAACTCTTCATCCGCCACATCCAGGGCCTCAGTCTCGAGGTCCAGAGCGAGCTGGCCGCTGCCATCCAGGAGGTGACCCAGCCGGGGGCCGGCGTGGTGCTGGCACTGTCTGGGCCAGATCCTGGGGAGCTGGCACCTGCCGAGCTGGAGATGCTGTCCCGGAGCCTGATGGGGACACTGTCGAAGCTGGCACGGGAGCGTGACCTGGGGGCCCAGCGGCTGGCTGAACTGCTGCTGGAGCGAGAACCCCTCTGCTTGAGGCCTGAGGCTCCCTCTAGGGCTCCCGCCGAGGGCCCCTCGCACCATCTGGCCCTGCAGCTGGCCAACGCCAAGGCTCAGCTGCGGCGTCTGCGGCAGGAGCTGGAGGAGAAGGCCGAGCTGCTGCTAGACTCCCAGGCCGAGGTGCAGGGTTTGGAGGCCGAAATAAGAAGGCTCCGCCAGGAGGCCCAGGCGCTGTCGGGACAGGCCAAGCGGGCCGAGCTGTACCGCGAGGAGGCAGAGGCGCTGCGGGAGCGGGCCGGCCGCCTGCCCCGCCTGCAGGAGGAGCTGAGGCGCTGCCGCGAGCGGCTGCAGGCGGCTGAGGCCTACAAGAGTCAGCTGGAGGAGGAGCGGGTGCTCTCGGGGGTGCTGGAGGCGTCCAAGGCGCTGCTGGAAGAGCAGCTGGAGGCTGCCCGAGAGCGCTGCGCCCGGCTGCACGAGACCCAGCGCGAGAACCTGCTGCTGCGAACCCGGCTGGGCGAGGCCCATGCGGAGCTGGACTCTCTGCGGCATCAGGTGGACCAGCTGGCTGAGGAGAATGTGGAGCTGGAGCTGGAGCTTCAGCGGAGCTTGGAGCCACCTCCAGGATCCCCTGGGGAGGCACCCCTAGCAGGAGCGGCCCCCTCGCTGCAAGATGAGGTGAGGGAGGCAGAGGCTGGGCGGCTTCGGACCCTTGAGAGGGAGAACCGGGAGCTTCGGGGGCTGCTTCAGGTGCTTCAGGGGCAGCCAGGGGGCCAGCACCCCCTGCTGGAGGCACCGAGAGAGGACCCTGTTCTTCCAGTGCTGGAGGAGGCTCCCCAGACTCCTGTGGCCTTCGACCACAGCCCTCAGGGCTTGGTTCAGAAGGCAAGGGATGGAGGCCCCCAGGCCTTGGACTTGGCTCCCCCGGCATTAGACTCAGTGCTCGAGGCATCAGCTGAGTGTCCCCAGGCACCTGATTCAGACCCACAGGAGGCAGAGAGTCCCCTTCAGGCAGCTGCCATGGACCCCCAGGCCTCAGACTGGTCCCCGCAAGAGTCAGGCTCTCCTGTGGAGACACAGGAGTCCCCGGAGAAGGCTGGCCGTAGATCCTCTCTCCAGAGCCCTGCCTCTGTGGCCCCACCTCAGGGTCCAGGGACCAAAATTCAGGCCCCGCAGTTGCTGGGAGGAGAGACAGAGGGAAGAGAGGCTCCCCAAGGCGAGTTGGTGCCTGAGGCCTGGGGGTTGAGACAGGAGGGCCCTGAGCACAAGCCAGGGCCTTCGGAGCCCAGCTCTGTGCAGCTGGAGGAGCAGGAGGGCCCAAACCAGGGCCTGGACCTGGCCACGGGACAAGCAGAGGCCAGAGAGCATGACCAGAGGCTGGAAGGGACGGTCAGGGACCCAGCCTGGCAAAAACCACAGCAGAAGTCAGAAGGGGCTCTTGAGGTCCAGGTCTGGGAAGGCCCAATCCCAGGGGAGAGCCTGGCCAGTGGTGTCGCAGAGCAGGAGGCCCTCAGGGAGGAGGTGGCACAGTTGAGGAGAAAGGCTGAGGCCCTTGGAGATGAGCTGGAAGCCCAGGCCCGCAAGCTGGAGGCCCAAAACACGGAGGCTGCCCGCCTCTCCAAGGAGCTGGCCCAAGCGCGAAGGGCAGAGGCCGAGGCCCACCGGGAGGCAGAGGCCCAGGCCTGGGAGCAAGCCCGGCTGCGGGAGGCAGTGGAGGCTGCTGGCCAGGAGCTGGAGTCTGCGTCCCAGGAACGGGAGGCGCTGGTGGAGGCGCTGGCAGCAGCGGGCCGGGAGCGGAGGCAGTGGGAGCGTGAGGGGTCCAGGCTGCGGGCCCAGTCGGAGGCCGCCGAGGAACGGATGCAGGTGCTGGAGAGCGAGGGCCGCCAGCACTTGGAGGAGGCTGAGAGGGAGCGCCGGGAGAAGGAGGCCCTCCAGGCGGAGCTGGAGAAAGCTGTGGTGCGGGGCAAGGAGTTGGGGGACCGGCTGGAGCATTTGCAGCGTGAGCTGGAGCAGGCGGCTCTCGAGCGCCAGGAATTTCTGCGAGAAAAGGAAAGCCAGCACCAGAGGTACCAGGGCTTGGAGCAGCGGCTGGAAGCTGAGCTGCAGGCGGCGGCGACCAGCAAGGAGGAGGCGCTGATGGAGCTCAAGACCAGGGCCCTGCAGCTGGAAGAGGAGCTGTTCCAGCTGCGCCAGGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTCAGCTGGTGGAGACCCAGAATGTGCGGCTTATTGAGGTGGAGCGCAGTAATGCGATGCTGGTGGCAGAGAAGGCAGCTTTGCAGGGGCAGCTGCAGCACCTGGAGGGGCAGCTGGGGAGCCTGCAGGGCCGTGCCCAGGAGCTGCTGCTGCAGAGCCAGCGGGCGCAGGAGCACAGCAGCCGCCTGCAGGCCGAGAAGTCTGTGCTGGAGATTCAGGGCCAGGAGCTGCACCGGAAGCTGGAGGTGCTGGAGGAGGAGGTGCGGGCGGCACGGCAGTCCCAGGAGGAGACCCGCGGGCAGCAGCAGGCCCTGCTTCGGGACCACAAGGCCCTGGCACAGCTGCAGCGGCGGCAGGAGGCCGAGCTAGAGGGACTGCTGGTGCGGCACCGAGACCTCAAGGCCAACATGCGGGCACTGGAGCTGGCCCACCGGGAGCTGCAGGGCCGGCACGAGCAGCTGCAGGCCCAGCGGGCCAGCGTGGAGGCACAGGAGGTGGCCCTGCTGGCAGAGCGTGAACGCCTGATGCAAGATGGGCATCGGCAGCGGGGCCTGGAGGAGGAGCTGCGGAGGCTTCAGAGCGAGCACGACAGGGCTCAGATGCTGCTGGCAGAGTTGTCTCGGGAGCGGGGTGAGCTGCAGGGTGAACGCGGGGAGCTACGGGGCCGGCTGGCGCGGCTGGAGCTGGAGCGGGCACAGCTGGAGATGCAGAGCCAGCAGCTGCGCGAGTCCAACCAGCAGCTGGACCTGAGCGCCTGCCGGCTGACCACGCAGTGTGAGCTATTGACACAGCTGCGAAGTGCCCAGGAAGAGGAGAACCGGCAGCTGCTGGCTGAAGTTCAGGCCCTGAGCCGGGAGAACAGGGAGCTCCTGGAGCGCAGCCTGGAGAGTCGGGACCACCTGCACCGCGAACAGCGGGAGTACCTGGACCAGCTTAATGCCCTGCGCCGCGAGAAGCAGAAGCTCGTGGAGAAGATCATGGACCAATACCGCGTGCTGGAGCCTGTGCCCCTGCCCCGGACCAAGAAGGGCAGCTGGCTGGCAGACAAGGTGAAGAGGCTGATGCGGCCCCGGCGGGAGGGGGGCCCCCCTGGGGGGCTGCGCCTGGGGGCCGATGGGGCTGGCAGCACCGAGAGCCTGGGGGGCCCCCCGGAGACGGAGCTTCCTGAGGGCAGGGAGGCAGATGGGACAGGGTCCCCTTCCCCGGCACCCATGCGCCGGGCCCAGAGCTCCCTCTGCCTGCGGGATGAGACCTTGGCAGGCGGGCAGCGGCGGAAACTCAGCTCAAGGTTCCCGGTGGGGCGAAGCTCTGAGTCATTCAGCCCTGGGGACACCCCTAGGCAACGATTCCGACAGCGCCATCCAGGCCCCCTGGGGGCGCCCGTCTCCCACAGCAAAGGACCTGGTGTGGGATGGGAGAACTCCGCTGAGACCCTGCAGGAACACGAAACAGATGCCAACCGAGAGGGCCCTGAGGTACAGGAACCGGAGAAACGTCCCCTCACCCCATCCCTCAGCCAGTGA
Amino sequence
MEGGKGPRLRDFLSGSLATWALGLAGLVGEAEDSEGEEEEEEEEPPLWLEKRFLRLSDGALLLRVLGIIAPSSRGGPRMLRGLDGPAAWRVWNLNHLWGRLRDFYQEELQLLILSPPPDLQTLGFDPLSEEAVEQLEGVLRLLLGASVQCEHRELFIRHIQGLSLEVQSELAAAIQEVTQPGAGVVLALSGPDPGELAPAELEMLSRSLMGTLSKLARERDLGAQRLAELLLEREPLCLRPEAPSRAPAEGPSHHLALQLANAKAQLRRLRQELEEKAELLLDSQAEVQGLEAEIRRLRQEAQALSGQAKRAELYREEAEALRERAGRLPRLQEELRRCRERLQAAEAYKSQLEEERVLSGVLEASKALLEEQLEAARERCARLHETQRENLLLRTRLGEAHAELDSLRHQVDQLAEENVELELELQRSLEPPPGSPGEAPLAGAAPSLQDEVREAEAGRLRTLERENRELRGLLQVLQGQPGGQHPLLEAPREDPVLPVLEEAPQTPVAFDHSPQGLVQKARDGGPQALDLAPPALDSVLEASAECPQAPDSDPQEAESPLQAAAMDPQASDWSPQESGSPVETQESPEKAGRRSSLQSPASVAPPQGPGTKIQAPQLLGGETEGREAPQGELVPEAWGLRQEGPEHKPGPSEPSSVQLEEQEGPNQGLDLATGQAEAREHDQRLEGTVRDPAWQKPQQKSEGALEVQVWEGPIPGESLASGVAEQEALREEVAQLRRKAEALGDELEAQARKLEAQNTEAARLSKELAQARRAEAEAHREAEAQAWEQARLREAVEAAGQELESASQEREALVEALAAAGRERRQWEREGSRLRAQSEAAEERMQVLESEGRQHLEEAERERREKEALQAELEKAVVRGKELGDRLEHLQRELEQAALERQEFLREKESQHQRYQGLEQRLEAELQAAATSKEEALMELKTRALQLEEELFQLRQGPAGLGPKKRAEPQLVETQNVRLIEVERSNAMLVAEKAALQGQLQHLEGQLGSLQGRAQELLLQSQRAQEHSSRLQAEKSVLEIQGQELHRKLEVLEEEVRAARQSQEETRGQQQALLRDHKALAQLQRRQEAELEGLLVRHRDLKANMRALELAHRELQGRHEQLQAQRASVEAQEVALLAERERLMQDGHRQRGLEEELRRLQSEHDRAQMLLAELSRERGELQGERGELRGRLARLELERAQLEMQSQQLRESNQQLDLSACRLTTQCELLTQLRSAQEEENRQLLAEVQALSRENRELLERSLESRDHLHREQREYLDQLNALRREKQKLVEKIMDQYRVLEPVPLPRTKKGSWLADKVKRLMRPRREGGPPGGLRLGADGAGSTESLGGPPETELPEGREADGTGSPSPAPMRRAQSSLCLRDETLAGGQRRKLSSRFPVGRSSESFSPGDTPRQRFRQRHPGPLGAPVSHSKGPGVGWENSAETLQEHETDANREGPEVQEPEKRPLTPSLSQ*