ENST00000356786.10 CCDC88B

Information
Transcript ID
ENST00000356786.10
Genome
hg19
Position
chr11:64,107,676-64,125,006
Strand
+
CDS length
4,431
Amino acid length
1,477
Gene symbol
CCDC88B
Gene type
protein-coding
Gene description
coiled-coil domain containing 88B
Gene Entrez Gene ID
283234
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 64,107,676 64,107,798
2 64,108,079 64,108,224
3 64,108,379 64,108,490
4 64,108,581 64,108,650
5 64,108,742 64,108,800
6 64,108,893 64,108,976
7 64,109,071 64,109,214
8 64,109,466 64,109,611
9 64,109,766 64,109,847
10 64,109,994 64,110,152
11 64,110,651 64,110,797
12 64,110,979 64,111,087
13 64,111,250 64,111,386
14 64,111,469 64,112,629
15 64,116,803 64,116,930
16 64,117,023 64,117,140
17 64,118,632 64,118,727
18 64,118,948 64,119,088
19 64,119,602 64,119,858
20 64,120,216 64,120,359
21 64,120,526 64,120,712
22 64,120,823 64,120,968
23 64,121,187 64,121,285
24 64,121,476 64,121,642
25 64,122,666 64,122,872
26 64,123,032 64,123,100
27 64,124,511 64,125,006
CDS
Exon number Type Start Stop
1 CDS 64,107,739 64,107,798
2 CDS 64,108,079 64,108,224
3 CDS 64,108,379 64,108,490
4 CDS 64,108,581 64,108,650
5 CDS 64,108,742 64,108,800
6 CDS 64,108,893 64,108,976
7 CDS 64,109,071 64,109,214
8 CDS 64,109,466 64,109,611
9 CDS 64,109,766 64,109,847
10 CDS 64,109,994 64,110,152
11 CDS 64,110,651 64,110,797
12 CDS 64,110,979 64,111,087
13 CDS 64,111,250 64,111,386
14 CDS 64,111,469 64,112,629
15 CDS 64,116,803 64,116,930
16 CDS 64,117,023 64,117,140
17 CDS 64,118,632 64,118,727
18 CDS 64,118,948 64,119,088
19 CDS 64,119,602 64,119,858
20 CDS 64,120,216 64,120,359
21 CDS 64,120,526 64,120,712
22 CDS 64,120,823 64,120,968
23 CDS 64,121,187 64,121,285
24 CDS 64,121,476 64,121,642
25 CDS 64,122,666 64,122,872
26 CDS 64,123,032 64,123,100
27 CDS 64,124,511 64,124,566
Other genome
Genome Chromosome Start End Links
hg38 chr11 64,340,204 64,357,534 Link
CDS sequence
ATGGAGGGGGGCAAGGGGCCCAGGCTCAGAGACTTCCTGAGTGGGAGTCTGGCTACCTGGGCGCTGGGACTGGCCGGGCTGGTCGGGGAGGCGGAGGACTCGGAGGGGGAAGAAGAGGAAGAGGAGGAAGAGCCGCCCCTTTGGTTGGAGAAGAGATTCCTGCGCCTCAGCGATGGGGCCCTGCTCCTCCGGGTGCTGGGCATCATTGCCCCCAGCTCCCGAGGGGGACCTCGGATGCTCAGAGGCCTTGACGGACCTGCTGCCTGGCGAGTGTGGAACCTGAACCACCTGTGGGGCCGACTGAGGGACTTCTACCAGGAGGAGCTGCAGCTGCTGATCCTGTCGCCACCCCCAGACCTCCAGACATTGGGATTTGACCCTCTCTCAGAAGAAGCGGTGGAGCAGCTGGAAGGCGTTCTTCGGCTACTGTTGGGAGCGTCAGTACAGTGTGAGCACCGGGAACTCTTCATCCGCCACATCCAGGGCCTCAGTCTCGAGGTCCAGAGCGAGCTGGCCGCTGCCATCCAGGAGGTGACCCAGCCGGGGGCCGGCGTGGTGCTGGCACTGTCTGGGCCAGATCCTGGGGAGCTGGCACCTGCCGAGCTGGAGATGCTGTCCCGGAGCCTGATGGGGACACTGTCGAAGCTGGCACGGGAGCGTGACCTGGGGGCCCAGCGGCTGGCTGAACTGCTGCTGGAGCGAGAACCCCTCTGCTTGAGGCCTGAGGCTCCCTCTAGGGCTCCCGCCGAGGGCCCCTCGCACCATCTGGCCCTGCAGCTGGCCAACGCCAAGGCTCAGCTGCGGCGTCTGCGGCAGGAGCTGGAGGAGAAGGCCGAGCTGCTGCTAGACTCCCAGGCCGAGGTGCAGGGTTTGGAGGCCGAAATAAGAAGGCTCCGCCAGGAGGCCCAGGCGCTGTCGGGACAGGCCAAGCGGGCCGAGCTGTACCGCGAGGAGGCAGAGGCGCTGCGGGAGCGGGCCGGCCGCCTGCCCCGCCTGCAGGAGGAGCTGAGGCGCTGCCGCGAGCGGCTGCAGGCGGCTGAGGCCTACAAGAGTCAGCTGGAGGAGGAGCGGGTGCTCTCGGGGGTGCTGGAGGCGTCCAAGGCGCTGCTGGAAGAGCAGCTGGAGGCTGCCCGAGAGCGCTGCGCCCGGCTGCACGAGACCCAGCGCGAGAACCTGCTGCTGCGAACCCGGCTGGGCGAGGCCCATGCGGAGCTGGACTCTCTGCGGCATCAGGTGGACCAGCTGGCTGAGGAGAATGTGGAGCTGGAGCTGGAGCTTCAGCGGAGCTTGGAGCCACCTCCAGGATCCCCTGGGGAGGCACCCCTAGCAGGAGCGGCCCCCTCGCTGCAAGATGAGGTGAGGGAGGCAGAGGCTGGGCGGCTTCGGACCCTTGAGAGGGAGAACCGGGAGCTTCGGGGGCTGCTTCAGGTGCTTCAGGGGCAGCCAGGGGGCCAGCACCCCCTGCTGGAGGCACCGAGAGAGGACCCTGTTCTTCCAGTGCTGGAGGAGGCTCCCCAGACTCCTGTGGCCTTCGACCACAGCCCTCAGGGCTTGGTTCAGAAGGCAAGGGATGGAGGCCCCCAGGCCTTGGACTTGGCTCCCCCGGCATTAGACTCAGTGCTCGAGGCATCAGCTGAGTGTCCCCAGGCACCTGATTCAGACCCACAGGAGGCAGAGAGTCCCCTTCAGGCAGCTGCCATGGACCCCCAGGCCTCAGACTGGTCCCCGCAAGAGTCAGGCTCTCCTGTGGAGACACAGGAGTCCCCGGAGAAGGCTGGCCGTAGATCCTCTCTCCAGAGCCCTGCCTCTGTGGCCCCACCTCAGGGTCCAGGGACCAAAATTCAGGCCCCGCAGTTGCTGGGAGGAGAGACAGAGGGAAGAGAGGCTCCCCAAGGCGAGTTGGTGCCTGAGGCCTGGGGGTTGAGACAGGAGGGCCCTGAGCACAAGCCAGGGCCTTCGGAGCCCAGCTCTGTGCAGCTGGAGGAGCAGGAGGGCCCAAACCAGGGCCTGGACCTGGCCACGGGACAAGCAGAGGCCAGAGAGCATGACCAGAGGCTGGAAGGGACGGTCAGGGACCCAGCCTGGCAAAAACCACAGCAGAAGTCAGAAGGGGCTCTTGAGGTCCAGGTCTGGGAAGGCCCAATCCCAGGGGAGAGCCTGGCCAGTGGTGTCGCAGAGCAGGAGGCCCTCAGGGAGGAGGTGGCACAGTTGAGGAGAAAGGCTGAGGCCCTTGGAGATGAGCTGGAAGCCCAGGCCCGCAAGCTGGAGGCCCAAAACACGGAGGCTGCCCGCCTCTCCAAGGAGCTGGCCCAAGCGCGAAGGGCAGAGGCCGAGGCCCACCGGGAGGCAGAGGCCCAGGCCTGGGAGCAAGCCCGGCTGCGGGAGGCAGTGGAGGCTGCTGGCCAGGAGCTGGAGTCTGCGTCCCAGGAACGGGAGGCGCTGGTGGAGGCGCTGGCAGCAGCGGGCCGGGAGCGGAGGCAGTGGGAGCGTGAGGGGTCCAGGCTGCGGGCCCAGTCGGAGGCCGCCGAGGAACGGATGCAGGTGCTGGAGAGCGAGGGCCGCCAGCACTTGGAGGAGGCTGAGAGGGAGCGCCGGGAGAAGGAGGCCCTCCAGGCGGAGCTGGAGAAAGCTGTGGTGCGGGGCAAGGAGTTGGGGGACCGGCTGGAGCATTTGCAGCGTGAGCTGGAGCAGGCGGCTCTCGAGCGCCAGGAATTTCTGCGAGAAAAGGAAAGCCAGCACCAGAGGTACCAGGGCTTGGAGCAGCGGCTGGAAGCTGAGCTGCAGGCGGCGGCGACCAGCAAGGAGGAGGCGCTGATGGAGCTCAAGACCAGGGCCCTGCAGCTGGAAGAGGAGCTGTTCCAGCTGCGCCAGGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTCAGCTGGTGGAGACCCAGAATGTGCGGCTTATTGAGGTGGAGCGCAGTAATGCGATGCTGGTGGCAGAGAAGGCAGCTTTGCAGGGGCAGCTGCAGCACCTGGAGGGGCAGCTGGGGAGCCTGCAGGGCCGTGCCCAGGAGCTGCTGCTGCAGAGCCAGCGGGCGCAGGAGCACAGCAGCCGCCTGCAGGCCGAGAAGTCTGTGCTGGAGATTCAGGGCCAGGAGCTGCACCGGAAGCTGGAGGTGCTGGAGGAGGAGGTGCGGGCGGCACGGCAGTCCCAGGAGGAGACCCGCGGGCAGCAGCAGGCCCTGCTTCGGGACCACAAGGCCCTGGCACAGCTGCAGCGGCGGCAGGAGGCCGAGCTAGAGGGACTGCTGGTGCGGCACCGAGACCTCAAGGCCAACATGCGGGCACTGGAGCTGGCCCACCGGGAGCTGCAGGGCCGGCACGAGCAGCTGCAGGCCCAGCGGGCCAGCGTGGAGGCACAGGAGGTGGCCCTGCTGGCAGAGCGTGAACGCCTGATGCAAGATGGGCATCGGCAGCGGGGCCTGGAGGAGGAGCTGCGGAGGCTTCAGAGCGAGCACGACAGGGCTCAGATGCTGCTGGCAGAGTTGTCTCGGGAGCGGGGTGAGCTGCAGGGTGAACGCGGGGAGCTACGGGGCCGGCTGGCGCGGCTGGAGCTGGAGCGGGCACAGCTGGAGATGCAGAGCCAGCAGCTGCGCGAGTCCAACCAGCAGCTGGACCTGAGCGCCTGCCGGCTGACCACGCAGTGTGAGCTATTGACACAGCTGCGAAGTGCCCAGGAAGAGGAGAACCGGCAGCTGCTGGCTGAAGTTCAGGCCCTGAGCCGGGAGAACAGGGAGCTCCTGGAGCGCAGCCTGGAGAGTCGGGACCACCTGCACCGCGAACAGCGGGAGTACCTGGACCAGCTTAATGCCCTGCGCCGCGAGAAGCAGAAGCTCGTGGAGAAGATCATGGACCAATACCGCGTGCTGGAGCCTGTGCCCCTGCCCCGGACCAAGAAGGGCAGCTGGCTGGCAGACAAGGTGAAGAGGCTGATGCGGCCCCGGCGGGAGGGGGGCCCCCCTGGGGGGCTGCGCCTGGGGGCCGATGGGGCTGGCAGCACCGAGAGCCTGGGGGGCCCCCCGGAGACGGAGCTTCCTGAGGGCAGGGAGGCAGATGGGACAGGGTCCCCTTCCCCGGCACCCATGCGCCGGGCCCAGAGCTCCCTCTGCCTGCGGGATGAGACCTTGGCAGGCGGGCAGCGGCGGAAACTCAGCTCAAGGTTCCCGGTGGGGCGAAGCTCTGAGTCATTCAGCCCTGGGGACACCCCTAGGCAACGATTCCGACAGCGCCATCCAGGCCCCCTGGGGGCGCCCGTCTCCCACAGCAAAGGACCTGGTGTGGGATGGGAGAACTCCGCTGAGACCCTGCAGGAACACGAAACAGATGCCAACCGAGAGGGCCCTGAGGTACAGGAACCGGAGAAACGTCCCCTCACCCCATCCCTCAGCCAGTGA
Amino sequence
MEGGKGPRLRDFLSGSLATWALGLAGLVGEAEDSEGEEEEEEEEPPLWLEKRFLRLSDGALLLRVLGIIAPSSRGGPRMLRGLDGPAAWRVWNLNHLWGRLRDFYQEELQLLILSPPPDLQTLGFDPLSEEAVEQLEGVLRLLLGASVQCEHRELFIRHIQGLSLEVQSELAAAIQEVTQPGAGVVLALSGPDPGELAPAELEMLSRSLMGTLSKLARERDLGAQRLAELLLEREPLCLRPEAPSRAPAEGPSHHLALQLANAKAQLRRLRQELEEKAELLLDSQAEVQGLEAEIRRLRQEAQALSGQAKRAELYREEAEALRERAGRLPRLQEELRRCRERLQAAEAYKSQLEEERVLSGVLEASKALLEEQLEAARERCARLHETQRENLLLRTRLGEAHAELDSLRHQVDQLAEENVELELELQRSLEPPPGSPGEAPLAGAAPSLQDEVREAEAGRLRTLERENRELRGLLQVLQGQPGGQHPLLEAPREDPVLPVLEEAPQTPVAFDHSPQGLVQKARDGGPQALDLAPPALDSVLEASAECPQAPDSDPQEAESPLQAAAMDPQASDWSPQESGSPVETQESPEKAGRRSSLQSPASVAPPQGPGTKIQAPQLLGGETEGREAPQGELVPEAWGLRQEGPEHKPGPSEPSSVQLEEQEGPNQGLDLATGQAEAREHDQRLEGTVRDPAWQKPQQKSEGALEVQVWEGPIPGESLASGVAEQEALREEVAQLRRKAEALGDELEAQARKLEAQNTEAARLSKELAQARRAEAEAHREAEAQAWEQARLREAVEAAGQELESASQEREALVEALAAAGRERRQWEREGSRLRAQSEAAEERMQVLESEGRQHLEEAERERREKEALQAELEKAVVRGKELGDRLEHLQRELEQAALERQEFLREKESQHQRYQGLEQRLEAELQAAATSKEEALMELKTRALQLEEELFQLRQGPAGLGPKKRAEPQLVETQNVRLIEVERSNAMLVAEKAALQGQLQHLEGQLGSLQGRAQELLLQSQRAQEHSSRLQAEKSVLEIQGQELHRKLEVLEEEVRAARQSQEETRGQQQALLRDHKALAQLQRRQEAELEGLLVRHRDLKANMRALELAHRELQGRHEQLQAQRASVEAQEVALLAERERLMQDGHRQRGLEEELRRLQSEHDRAQMLLAELSRERGELQGERGELRGRLARLELERAQLEMQSQQLRESNQQLDLSACRLTTQCELLTQLRSAQEEENRQLLAEVQALSRENRELLERSLESRDHLHREQREYLDQLNALRREKQKLVEKIMDQYRVLEPVPLPRTKKGSWLADKVKRLMRPRREGGPPGGLRLGADGAGSTESLGGPPETELPEGREADGTGSPSPAPMRRAQSSLCLRDETLAGGQRRKLSSRFPVGRSSESFSPGDTPRQRFRQRHPGPLGAPVSHSKGPGVGWENSAETLQEHETDANREGPEVQEPEKRPLTPSLSQ*