ENST00000580437.5 SECTM1

Information
Transcript ID
ENST00000580437.5
Genome
hg38
Position
chr17:82,321,887-82,333,762
Strand
-
CDS length
450
Amino acid length
150
Gene symbol
SECTM1
Gene type
protein-coding
Gene description
secreted and transmembrane 1
Gene Entrez Gene ID
6398
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 82,321,887 82,322,370
4 82,322,878 82,322,905
3 82,324,582 82,324,890
2 82,327,147 82,327,292
1 82,333,700 82,333,762
CDS
Exon number Type Start Stop
5 CDS 82,322,352 82,322,370
4 CDS 82,322,878 82,322,905
3 CDS 82,324,582 82,324,890
2 CDS 82,327,147 82,327,240
Other genome
Genome Chromosome Start End Links
hg19 chr17 80,279,763 80,291,638 Link
CDS sequence
ATGCAGACCTGCCCCCTGGCATTCCCTGGCCACGTTTCCCAGGCCCTTGGGACCCTCCTGTTTTTGGCTGCCTCCTTGAGTGCTCAGAATGAAGGCTGGGACAGCCCCATCTGCACAGAGGGGGTAGTCTCTGTGTCTTGGGGCGAGAACACCGTCATGTCCTGCAACATCTCCAACGCCTTCTCCCATGTCAACATCAAGCTGCGTGCCCACGGGCAGGAGAGCGCCATCTTCAATGAGGTGGCTCCAGGCTACTTCTCCCGGGACGGCTGGCAGCTCCAGGTTCAGGGAGGCGTGGCACAGCTGGTGATCAAAGGCGCCCGGGACTCCCATGCTGGGCTGTACATGTGGCACCTCGTGGGACACCAGAGAAATAACAGACAAGTCACGCTGGAGGTTTCAGGTGCCGCTGTTCCCAGCAACGCCGGGAGAAGAAGTTCTTCCTCCTAG
Amino sequence
MQTCPLAFPGHVSQALGTLLFLAASLSAQNEGWDSPICTEGVVSVSWGENTVMSCNISNAFSHVNIKLRAHGQESAIFNEVAPGYFSRDGWQLQVQGGVAQLVIKGARDSHAGLYMWHLVGHQRNNRQVTLEVSGAAVPSNAGRRSSSS*