ENST00000620105.5 C18orf54

Information
Transcript ID
ENST00000620105.5
Genome
hg38
Position
chr18:54,357,906-54,382,034
Strand
+
CDS length
1,602
Amino acid length
534
Gene symbol
C18orf54
Gene type
protein-coding
Gene description
chromosome 18 open reading frame 54
Gene Entrez Gene ID
162681
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 54,357,906 54,358,075
2 54,358,774 54,358,870
3 54,360,527 54,360,855
4 54,361,643 54,362,431
5 54,362,771 54,362,921
6 54,365,719 54,365,821
7 54,372,466 54,372,597
8 54,374,214 54,374,284
9 54,378,174 54,382,034
CDS
Exon number Type Start Stop
3 CDS 54,360,573 54,360,855
4 CDS 54,361,643 54,362,431
5 CDS 54,362,771 54,362,921
6 CDS 54,365,719 54,365,821
7 CDS 54,372,466 54,372,597
8 CDS 54,374,214 54,374,284
9 CDS 54,378,174 54,378,246
Other genome
Genome Chromosome Start End Links
hg19 chr18 51,884,276 51,908,404 Link
CDS sequence
ATGGCGAAATCAAAGACAAAACATAGACTTTGTTCTCAGGAATCTTCAGTATCTGCCCTGCTGGCAAGCTGCACCCTGAGTGGTAGTAATTCCTCTAATTCTGATGGCTCGTTTCACTATAAAGATAAGCTGTACAGATCTGCTTCTCAAGCTCTACAGGCTTATATTGATGATTTTGATCTAGGCCAAATATATCCTGGTGCAAGCACTGGAAAAATTAACATTGATGAGGATTTTACTAATATGTCACAGTTCTGCAACTATATTTACAAACCAAACAATGCTTTTGAAAACCTTGATCACAAAAAGCACTCAAACTTCATATCCTGTAGAAGACACACCGTTAATGACATAGACTCCATGAGCCTAACAACTGATGATCTATTAAGACTCCCAGCAGATGGATCATTTTCTTATACTTATGTTGGACCGAGTCACCGAACGAGCAAGAAAAACAAGAAATGCCGTGGAAGACTGGGTTCATTGGACATTGAGAAGAATCCACATTTTCAAGGACCCTACACTTCCATGGGCAAGGATAACTTTGTTACTCCTGTTATACGCTCAAATATAAATGGAAAGCAATGTGGTAGGCTGAAAAACCCAAAACTTATGAATAGGACTAATAATTGCATTTCTGAATCATCTTTGTCTTTTCCCAAGAAATCGTCTTTCAAGGACAGTTCAGAACACAGTCTTGAAAAGAATTACCCAAGATGGCTCACTAGCCAGAAATCTGACCTTAATGTTTCAGGGATAACTAGTATACCTGATTTCAAATACCCAGTCTGGCTGCACAATCAAGACTTGCTACCTGATGCAAATAGTCAAAGGGTTTATCAGATATTTAAAGATGATCAGTGTTCCCCTAGACATAGTCATCAGGCACAAGGAACTTCTCGGCTTATCAATAAATTAGATTGTTTTGAATATGCTTTTGAACCCTCAAACTTTTCAAATTCCTTGAGTGATGATAAAGAATTAGTTAATGAATACAAATGTGATTTTGAACATAGCCAGTGTCAATGTGAGAATCCACTTCTCCCAGGACAATCCACAAAGCCATTCAGTGGTGACAAAATTGAATTGCTTATCTTGAAGGCCAAGAGAAATCTAGAGCAGTGTACTGAAGAATTACCAAAGTCCATGAAAAAGGATGACAGTCCTTGCTCATTAGATAAACTTGAAGCAGACAGATCATGGGAAAATATTCCTGTTACTTTCAAATCTCCTGTTCCCGTTAACTCTGATGATAGTCCTCAACAAACTTCAAGGGCAAAGAGTGCTAAAGGGGTTCTTGAAGACTTTCTAAATAATGATAATCAGAGCTGTACTCTCTCTGGAGGCAAACATCATGGTCCTGTTGAAGCCCTGAAACAAATGTTATTTAACCTTCAAGCAGTACAAGAACGTTTTAATCAAAATAAGACCACAGATCCAAAAGAAGAGATTAAACAAGTTTCAGAAGATGATTTCTCTAAATTACAGTTGAAGGAAAGTATGATTCCTATTACTAGGTCACTTCAGAAGGCTTTGCACCATTTATCTCGCCTGAGAGACCTGGTTGATGATACGAATGGAGAACGGTCACCGAAAATGTGA
Amino sequence
MAKSKTKHRLCSQESSVSALLASCTLSGSNSSNSDGSFHYKDKLYRSASQALQAYIDDFDLGQIYPGASTGKINIDEDFTNMSQFCNYIYKPNNAFENLDHKKHSNFISCRRHTVNDIDSMSLTTDDLLRLPADGSFSYTYVGPSHRTSKKNKKCRGRLGSLDIEKNPHFQGPYTSMGKDNFVTPVIRSNINGKQCGRLKNPKLMNRTNNCISESSLSFPKKSSFKDSSEHSLEKNYPRWLTSQKSDLNVSGITSIPDFKYPVWLHNQDLLPDANSQRVYQIFKDDQCSPRHSHQAQGTSRLINKLDCFEYAFEPSNFSNSLSDDKELVNEYKCDFEHSQCQCENPLLPGQSTKPFSGDKIELLILKAKRNLEQCTEELPKSMKKDDSPCSLDKLEADRSWENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQMLFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKALHHLSRLRDLVDDTNGERSPKM*