ENST00000620105.5 C18orf54

Information
Transcript ID
ENST00000620105.5
Genome
hg19
Position
chr18:51,884,276-51,908,404
Strand
+
CDS length
1,602
Amino acid length
534
Gene symbol
C18orf54
Gene type
protein-coding
Gene description
chromosome 18 open reading frame 54
Gene Entrez Gene ID
162681
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 51,884,276 51,884,445
2 51,885,144 51,885,240
3 51,886,897 51,887,225
4 51,888,013 51,888,801
5 51,889,141 51,889,291
6 51,892,089 51,892,191
7 51,898,836 51,898,967
8 51,900,584 51,900,654
9 51,904,544 51,908,404
CDS
Exon number Type Start Stop
3 CDS 51,886,943 51,887,225
4 CDS 51,888,013 51,888,801
5 CDS 51,889,141 51,889,291
6 CDS 51,892,089 51,892,191
7 CDS 51,898,836 51,898,967
8 CDS 51,900,584 51,900,654
9 CDS 51,904,544 51,904,616
Other genome
Genome Chromosome Start End Links
hg38 chr18 54,357,906 54,382,034 Link
CDS sequence
ATGGCGAAATCAAAGACAAAACATAGACTTTGTTCTCAGGAATCTTCAGTATCTGCCCTGCTGGCAAGCTGCACCCTGAGTGGTAGTAATTCCTCTAATTCTGATGGCTCGTTTCACTATAAAGATAAGCTGTACAGATCTGCTTCTCAAGCTCTACAGGCTTATATTGATGATTTTGATCTAGGCCAAATATATCCTGGTGCAAGCACTGGAAAAATTAACATTGATGAGGATTTTACTAATATGTCACAGTTCTGCAACTATATTTACAAACCAAACAATGCTTTTGAAAACCTTGATCACAAAAAGCACTCAAACTTCATATCCTGTAGAAGACACACCGTTAATGACATAGACTCCATGAGCCTAACAACTGATGATCTATTAAGACTCCCAGCAGATGGATCATTTTCTTATACTTATGTTGGACCGAGTCACCGAACGAGCAAGAAAAACAAGAAATGCCGTGGAAGACTGGGTTCATTGGACATTGAGAAGAATCCACATTTTCAAGGACCCTACACTTCCATGGGCAAGGATAACTTTGTTACTCCTGTTATACGCTCAAATATAAATGGAAAGCAATGTGGTAGGCTGAAAAACCCAAAACTTATGAATAGGACTAATAATTGCATTTCTGAATCATCTTTGTCTTTTCCCAAGAAATCGTCTTTCAAGGACAGTTCAGAACACAGTCTTGAAAAGAATTACCCAAGATGGCTCACTAGCCAGAAATCTGACCTTAATGTTTCAGGGATAACTAGTATACCTGATTTCAAATACCCAGTCTGGCTGCACAATCAAGACTTGCTACCTGATGCAAATAGTCAAAGGGTTTATCAGATATTTAAAGATGATCAGTGTTCCCCTAGACATAGTCATCAGGCACAAGGAACTTCTCGGCTTATCAATAAATTAGATTGTTTTGAATATGCTTTTGAACCCTCAAACTTTTCAAATTCCTTGAGTGATGATAAAGAATTAGTTAATGAATACAAATGTGATTTTGAACATAGCCAGTGTCAATGTGAGAATCCACTTCTCCCAGGACAATCCACAAAGCCATTCAGTGGTGACAAAATTGAATTGCTTATCTTGAAGGCCAAGAGAAATCTAGAGCAGTGTACTGAAGAATTACCAAAGTCCATGAAAAAGGATGACAGTCCTTGCTCATTAGATAAACTTGAAGCAGACAGATCATGGGAAAATATTCCTGTTACTTTCAAATCTCCTGTTCCCGTTAACTCTGATGATAGTCCTCAACAAACTTCAAGGGCAAAGAGTGCTAAAGGGGTTCTTGAAGACTTTCTAAATAATGATAATCAGAGCTGTACTCTCTCTGGAGGCAAACATCATGGTCCTGTTGAAGCCCTGAAACAAATGTTATTTAACCTTCAAGCAGTACAAGAACGTTTTAATCAAAATAAGACCACAGATCCAAAAGAAGAGATTAAACAAGTTTCAGAAGATGATTTCTCTAAATTACAGTTGAAGGAAAGTATGATTCCTATTACTAGGTCACTTCAGAAGGCTTTGCACCATTTATCTCGCCTGAGAGACCTGGTTGATGATACGAATGGAGAACGGTCACCGAAAATGTGA
Amino sequence
MAKSKTKHRLCSQESSVSALLASCTLSGSNSSNSDGSFHYKDKLYRSASQALQAYIDDFDLGQIYPGASTGKINIDEDFTNMSQFCNYIYKPNNAFENLDHKKHSNFISCRRHTVNDIDSMSLTTDDLLRLPADGSFSYTYVGPSHRTSKKNKKCRGRLGSLDIEKNPHFQGPYTSMGKDNFVTPVIRSNINGKQCGRLKNPKLMNRTNNCISESSLSFPKKSSFKDSSEHSLEKNYPRWLTSQKSDLNVSGITSIPDFKYPVWLHNQDLLPDANSQRVYQIFKDDQCSPRHSHQAQGTSRLINKLDCFEYAFEPSNFSNSLSDDKELVNEYKCDFEHSQCQCENPLLPGQSTKPFSGDKIELLILKAKRNLEQCTEELPKSMKKDDSPCSLDKLEADRSWENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQMLFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKALHHLSRLRDLVDDTNGERSPKM*