ENST00000359902.2 CCDC88B

Information
Transcript ID
ENST00000359902.2
Genome
hg38
Position
chr11:64,348,831-64,357,525
Strand
+
CDS length
2,139
Amino acid length
713
Gene symbol
CCDC88B
Gene type
protein-coding
Gene description
coiled-coil domain containing 88B
Gene Entrez Gene ID
283234
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 64,348,831 64,349,052
2 64,349,331 64,349,458
3 64,349,551 64,349,668
4 64,351,160 64,351,255
5 64,351,476 64,351,616
6 64,352,130 64,352,386
7 64,352,744 64,352,887
8 64,353,054 64,353,240
9 64,353,351 64,353,496
10 64,353,715 64,353,813
11 64,354,004 64,354,028
12 64,355,194 64,355,400
13 64,355,560 64,355,628
14 64,357,039 64,357,525
CDS
Exon number Type Start Stop
1 CDS 64,348,981 64,349,052
2 CDS 64,349,331 64,349,458
3 CDS 64,349,551 64,349,668
4 CDS 64,351,160 64,351,255
5 CDS 64,351,476 64,351,616
6 CDS 64,352,130 64,352,386
7 CDS 64,352,744 64,352,887
8 CDS 64,353,054 64,353,240
9 CDS 64,353,351 64,353,496
10 CDS 64,353,715 64,353,813
11 CDS 64,354,004 64,354,028
12 CDS 64,355,194 64,355,400
13 CDS 64,355,560 64,355,628
14 CDS 64,357,039 64,357,488
Other genome
Genome Chromosome Start End Links
hg19 chr11 64,116,303 64,124,997 Link
CDS sequence
ATGGCTGGGGTGGCAGCCCACCGGGCGCATCCACCTTTCACTGCGCACATGAAGAACCGTGGGCTCAGAGAGGAGCTGGAGAAAGCTGTGGTGCGGGGCAAGGAGTTGGGGGACCGGCTGGAGCATTTGCAGCGTGAGCTGGAGCAGGCGGCTCTCGAGCGCCAGGAATTTCTGCGAGAAAAGGAAAGCCAGCACCAGAGGTACCAGGGCTTGGAGCAGCGGCTGGAAGCTGAGCTGCAGGCGGCGGCGACCAGCAAGGAGGAGGCGCTGATGGAGCTCAAGACCAGGGCCCTGCAGCTGGAAGAGGAGCTGTTCCAGCTGCGCCAGGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTCAGCTGGTGGAGACCCAGAATGTGCGGCTTATTGAGGTGGAGCGCAGTAATGCGATGCTGGTGGCAGAGAAGGCAGCTTTGCAGGGGCAGCTGCAGCACCTGGAGGGGCAGCTGGGGAGCCTGCAGGGCCGTGCCCAGGAGCTGCTGCTGCAGAGCCAGCGGGCGCAGGAGCACAGCAGCCGCCTGCAGGCCGAGAAGTCTGTGCTGGAGATTCAGGGCCAGGAGCTGCACCGGAAGCTGGAGGTGCTGGAGGAGGAGGTGCGGGCGGCACGGCAGTCCCAGGAGGAGACCCGCGGGCAGCAGCAGGCCCTGCTTCGGGACCACAAGGCCCTGGCACAGCTGCAGCGGCGGCAGGAGGCCGAGCTAGAGGGACTGCTGGTGCGGCACCGAGACCTCAAGGCCAACATGCGGGCACTGGAGCTGGCCCACCGGGAGCTGCAGGGCCGGCACGAGCAGCTGCAGGCCCAGCGGGCCAGCGTGGAGGCACAGGAGGTGGCCCTGCTGGCAGAGCGTGAACGCCTGATGCAAGATGGGCATCGGCAGCGGGGCCTGGAGGAGGAGCTGCGGAGGCTTCAGAGCGAGCACGACAGGGCTCAGATGCTGCTGGCAGAGTTGTCTCGGGAGCGGGGTGAGCTGCAGGGTGAACGCGGGGAGCTACGGGGCCGGCTGGCGCGGCTGGAGCTGGAGCGGGCACAGCTGGAGATGCAGAGCCAGCAGCTGCGCGAGTCCAACCAGCAGCTGGACCTGAGCGCCTGCCGGCTGACCACGCAGTGTGAGCTATTGACACAGCTGCGAAGTGCCCAGGAAGAGGAGAACCGGCAGCTGCTGGCTGAAGTTCAGGCCCTGAGCCGGGAGAACAGGGAGCTCCTGGAGCGCAGCCTGGAGAGTCGGGACCACCTGCACCGCGAACAGCGGGAGTACCTGGACCAGCTTAATGCCCTGCGCCGCGAGAAGCAGAAGCTCGTGGAGAAGATCATGGACCAATACCGCGTGCTGGAGCCTGTGCCCCTGCCCCGGACCAAGAAGGGCAGCTGGCTGGCAGACAAGGGTCCCCTTCCCCGGCACCCATGCGCCGGGCCCAGAGCTCCCTCTGCCTGCGGGATGAGACCTTGGCAGGCGGGCAGCGGCGGAAACTCAGCTCAAGGTTCCCGGTGGGGCGAAGCTCTGAGTCATTCAGCCCTGGGGACACCCCTAGGCAACGATTCCGACAGCGCCATCCAGGCCCCCTGGGGGCGCCCGTCTCCCACAGCAAAGGACCTGGTGTGGGATGGGAGAACTCCGCTGAGACCCTGCAGGAACACGAAACAGATGCCAACCGAGAGGGCCCTGAGGTACAGGAACCGGAGAAACGTCCCCTCACCCCATCCCTCAGCCAGTGACACCGTGGGAACAGCAGGCTTGGGAGTGCAGCCTTCTCGGCACTGGAGTGTCAGCGGAGGCCCCAGGCAGCCCAAGAGCTCAGGGAGCCAGGGACCCCAAGGGGAGTCCTTGGACAAGGAGGCCTGGGCCCTGAGATCCTCCACGGTCAGCGCCGGGGCCCGGAGATGGAGCTGGGACGAGTGTGTGGACAGGGGGGATGGCTGGCCCCCACGAGCAGCTCCAGGCTGGAGTTCTGGTTCTTCCAGGTGGCTCCCGCTGAGGCAGCGGTCTCTGGGGGATCCCCCAGCTGAAGGAGGCTGGCAGGAGTTGGCAAGAGAACCCCCTGCCCTGTCCAGGTGGGAAGCTGAGTCCCAGTGCTGGGGGACTGTGGCCTGGGCTGATCTTGAGCCTTAA
Amino sequence
MAGVAAHRAHPPFTAHMKNRGLREELEKAVVRGKELGDRLEHLQRELEQAALERQEFLREKESQHQRYQGLEQRLEAELQAAATSKEEALMELKTRALQLEEELFQLRQGPAGLGPKKRAEPQLVETQNVRLIEVERSNAMLVAEKAALQGQLQHLEGQLGSLQGRAQELLLQSQRAQEHSSRLQAEKSVLEIQGQELHRKLEVLEEEVRAARQSQEETRGQQQALLRDHKALAQLQRRQEAELEGLLVRHRDLKANMRALELAHRELQGRHEQLQAQRASVEAQEVALLAERERLMQDGHRQRGLEEELRRLQSEHDRAQMLLAELSRERGELQGERGELRGRLARLELERAQLEMQSQQLRESNQQLDLSACRLTTQCELLTQLRSAQEEENRQLLAEVQALSRENRELLERSLESRDHLHREQREYLDQLNALRREKQKLVEKIMDQYRVLEPVPLPRTKKGSWLADKGPLPRHPCAGPRAPSACGMRPWQAGSGGNSAQGSRWGEALSHSALGTPLGNDSDSAIQAPWGRPSPTAKDLVWDGRTPLRPCRNTKQMPTERALRYRNRRNVPSPHPSASDTVGTAGLGVQPSRHWSVSGGPRQPKSSGSQGPQGESLDKEAWALRSSTVSAGARRWSWDECVDRGDGWPPRAAPGWSSGSSRWLPLRQRSLGDPPAEGGWQELAREPPALSRWEAESQCWGTVAWADLEP*