ENST00000359902.2 CCDC88B

Information
Transcript ID
ENST00000359902.2
Genome
hg19
Position
chr11:64,116,303-64,124,997
Strand
+
CDS length
2,139
Amino acid length
713
Gene symbol
CCDC88B
Gene type
protein-coding
Gene description
coiled-coil domain containing 88B
Gene Entrez Gene ID
283234
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 64,116,303 64,116,524
2 64,116,803 64,116,930
3 64,117,023 64,117,140
4 64,118,632 64,118,727
5 64,118,948 64,119,088
6 64,119,602 64,119,858
7 64,120,216 64,120,359
8 64,120,526 64,120,712
9 64,120,823 64,120,968
10 64,121,187 64,121,285
11 64,121,476 64,121,500
12 64,122,666 64,122,872
13 64,123,032 64,123,100
14 64,124,511 64,124,997
CDS
Exon number Type Start Stop
1 CDS 64,116,453 64,116,524
2 CDS 64,116,803 64,116,930
3 CDS 64,117,023 64,117,140
4 CDS 64,118,632 64,118,727
5 CDS 64,118,948 64,119,088
6 CDS 64,119,602 64,119,858
7 CDS 64,120,216 64,120,359
8 CDS 64,120,526 64,120,712
9 CDS 64,120,823 64,120,968
10 CDS 64,121,187 64,121,285
11 CDS 64,121,476 64,121,500
12 CDS 64,122,666 64,122,872
13 CDS 64,123,032 64,123,100
14 CDS 64,124,511 64,124,960
Other genome
Genome Chromosome Start End Links
hg38 chr11 64,348,831 64,357,525 Link
CDS sequence
ATGGCTGGGGTGGCAGCCCACCGGGCGCATCCACCTTTCACTGCGCACATGAAGAACCGTGGGCTCAGAGAGGAGCTGGAGAAAGCTGTGGTGCGGGGCAAGGAGTTGGGGGACCGGCTGGAGCATTTGCAGCGTGAGCTGGAGCAGGCGGCTCTCGAGCGCCAGGAATTTCTGCGAGAAAAGGAAAGCCAGCACCAGAGGTACCAGGGCTTGGAGCAGCGGCTGGAAGCTGAGCTGCAGGCGGCGGCGACCAGCAAGGAGGAGGCGCTGATGGAGCTCAAGACCAGGGCCCTGCAGCTGGAAGAGGAGCTGTTCCAGCTGCGCCAGGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTCAGCTGGTGGAGACCCAGAATGTGCGGCTTATTGAGGTGGAGCGCAGTAATGCGATGCTGGTGGCAGAGAAGGCAGCTTTGCAGGGGCAGCTGCAGCACCTGGAGGGGCAGCTGGGGAGCCTGCAGGGCCGTGCCCAGGAGCTGCTGCTGCAGAGCCAGCGGGCGCAGGAGCACAGCAGCCGCCTGCAGGCCGAGAAGTCTGTGCTGGAGATTCAGGGCCAGGAGCTGCACCGGAAGCTGGAGGTGCTGGAGGAGGAGGTGCGGGCGGCACGGCAGTCCCAGGAGGAGACCCGCGGGCAGCAGCAGGCCCTGCTTCGGGACCACAAGGCCCTGGCACAGCTGCAGCGGCGGCAGGAGGCCGAGCTAGAGGGACTGCTGGTGCGGCACCGAGACCTCAAGGCCAACATGCGGGCACTGGAGCTGGCCCACCGGGAGCTGCAGGGCCGGCACGAGCAGCTGCAGGCCCAGCGGGCCAGCGTGGAGGCACAGGAGGTGGCCCTGCTGGCAGAGCGTGAACGCCTGATGCAAGATGGGCATCGGCAGCGGGGCCTGGAGGAGGAGCTGCGGAGGCTTCAGAGCGAGCACGACAGGGCTCAGATGCTGCTGGCAGAGTTGTCTCGGGAGCGGGGTGAGCTGCAGGGTGAACGCGGGGAGCTACGGGGCCGGCTGGCGCGGCTGGAGCTGGAGCGGGCACAGCTGGAGATGCAGAGCCAGCAGCTGCGCGAGTCCAACCAGCAGCTGGACCTGAGCGCCTGCCGGCTGACCACGCAGTGTGAGCTATTGACACAGCTGCGAAGTGCCCAGGAAGAGGAGAACCGGCAGCTGCTGGCTGAAGTTCAGGCCCTGAGCCGGGAGAACAGGGAGCTCCTGGAGCGCAGCCTGGAGAGTCGGGACCACCTGCACCGCGAACAGCGGGAGTACCTGGACCAGCTTAATGCCCTGCGCCGCGAGAAGCAGAAGCTCGTGGAGAAGATCATGGACCAATACCGCGTGCTGGAGCCTGTGCCCCTGCCCCGGACCAAGAAGGGCAGCTGGCTGGCAGACAAGGGTCCCCTTCCCCGGCACCCATGCGCCGGGCCCAGAGCTCCCTCTGCCTGCGGGATGAGACCTTGGCAGGCGGGCAGCGGCGGAAACTCAGCTCAAGGTTCCCGGTGGGGCGAAGCTCTGAGTCATTCAGCCCTGGGGACACCCCTAGGCAACGATTCCGACAGCGCCATCCAGGCCCCCTGGGGGCGCCCGTCTCCCACAGCAAAGGACCTGGTGTGGGATGGGAGAACTCCGCTGAGACCCTGCAGGAACACGAAACAGATGCCAACCGAGAGGGCCCTGAGGTACAGGAACCGGAGAAACGTCCCCTCACCCCATCCCTCAGCCAGTGACACCGTGGGAACAGCAGGCTTGGGAGTGCAGCCTTCTCGGCACTGGAGTGTCAGCGGAGGCCCCAGGCAGCCCAAGAGCTCAGGGAGCCAGGGACCCCAAGGGGAGTCCTTGGACAAGGAGGCCTGGGCCCTGAGATCCTCCACGGTCAGCGCCGGGGCCCGGAGATGGAGCTGGGACGAGTGTGTGGACAGGGGGGATGGCTGGCCCCCACGAGCAGCTCCAGGCTGGAGTTCTGGTTCTTCCAGGTGGCTCCCGCTGAGGCAGCGGTCTCTGGGGGATCCCCCAGCTGAAGGAGGCTGGCAGGAGTTGGCAAGAGAACCCCCTGCCCTGTCCAGGTGGGAAGCTGAGTCCCAGTGCTGGGGGACTGTGGCCTGGGCTGATCTTGAGCCTTAA
Amino sequence
MAGVAAHRAHPPFTAHMKNRGLREELEKAVVRGKELGDRLEHLQRELEQAALERQEFLREKESQHQRYQGLEQRLEAELQAAATSKEEALMELKTRALQLEEELFQLRQGPAGLGPKKRAEPQLVETQNVRLIEVERSNAMLVAEKAALQGQLQHLEGQLGSLQGRAQELLLQSQRAQEHSSRLQAEKSVLEIQGQELHRKLEVLEEEVRAARQSQEETRGQQQALLRDHKALAQLQRRQEAELEGLLVRHRDLKANMRALELAHRELQGRHEQLQAQRASVEAQEVALLAERERLMQDGHRQRGLEEELRRLQSEHDRAQMLLAELSRERGELQGERGELRGRLARLELERAQLEMQSQQLRESNQQLDLSACRLTTQCELLTQLRSAQEEENRQLLAEVQALSRENRELLERSLESRDHLHREQREYLDQLNALRREKQKLVEKIMDQYRVLEPVPLPRTKKGSWLADKGPLPRHPCAGPRAPSACGMRPWQAGSGGNSAQGSRWGEALSHSALGTPLGNDSDSAIQAPWGRPSPTAKDLVWDGRTPLRPCRNTKQMPTERALRYRNRRNVPSPHPSASDTVGTAGLGVQPSRHWSVSGGPRQPKSSGSQGPQGESLDKEAWALRSSTVSAGARRWSWDECVDRGDGWPPRAAPGWSSGSSRWLPLRQRSLGDPPAEGGWQELAREPPALSRWEAESQCWGTVAWADLEP*