ENST00000396166.7 PTPN5
Information
- Transcript ID
- ENST00000396166.7
- Genome
- hg38
- Position
- chr11:18,727,930-18,730,744
- Strand
- -
- CDS length
- 516
- Amino acid length
- 172
- Gene symbol
- PTPN5
- Gene type
- protein-coding
- Gene description
- protein tyrosine phosphatase non-receptor type 5
- Gene Entrez Gene ID
- 84867
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 3 | 18,727,930 | 18,729,027 |
| 2 | 18,729,453 | 18,729,566 |
| 1 | 18,729,658 | 18,730,744 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 18,728,934 | 18,729,027 |
| 2 | CDS | 18,729,453 | 18,729,566 |
| 1 | CDS | 18,729,658 | 18,729,965 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 18,749,477 | 18,752,291 | Link |
CDS sequence
ATGTGGCCTAGATGGAAGGGTGAAGGGGTCCCACTCTCAGTGTTCTTCCTGTGTTCTTCCTCCTTCCATCTCATCTCTATCTCTGGGCTGGTTTGTGAGCTGAAAGAGTTCACACATACCTGGGGTGGGCCTCTGTCTCCTCGACAGAGTGGGACTGAGGAGCGAGGCCTGAAGCATTACTGGTTCACATCCTGGCCCGACCAGAAGACCCCAGACCGGGCCCCCCCACTCCTGCACCTGGTGCGGGAGGTGGAGGAGGCAGCCCAGCAGGAGGGGCCCCACTGTGCCCCCATCATCGTCCACTGCAGTGCAGGGATTGGGAGGACCGGCTGCTTCATTGCCACCAGCATCTGCTGCCAGCAGCTGCGGCAGGAGGGTGTGGTGGACATCCTGAAGACCACGTGCCAGCTCCGTCAGGACAGGGGCGGCATGATCCAGACATGCGAGCAGTACCAGTTTGTGCACCACGTCATGAGCCTCTACGAAAAGCAGCTGTCCCACCAGTCCCCAGAATGA
Amino sequence
MWPRWKGEGVPLSVFFLCSSSFHLISISGLVCELKEFTHTWGGPLSPRQSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHCSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLYEKQLSHQSPE*