ENST00000233202.11 SLC11A1
Information
- Transcript ID
- ENST00000233202.11
- Genome
- hg38
- Position
- chr2:218,382,273-218,396,894
- Strand
- +
- CDS length
- 1,653
- Amino acid length
- 551
- Gene symbol
- SLC11A1
- Gene type
- protein-coding
- Gene description
- solute carrier family 11 member 1
- Gene Entrez Gene ID
- 6556
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 218,382,273 | 218,382,375 |
| 2 | 218,382,960 | 218,383,102 |
| 3 | 218,384,243 | 218,384,365 |
| 4 | 218,385,147 | 218,385,266 |
| 5 | 218,386,635 | 218,386,741 |
| 6 | 218,387,160 | 218,387,230 |
| 7 | 218,387,565 | 218,387,632 |
| 8 | 218,387,800 | 218,387,955 |
| 9 | 218,389,870 | 218,390,028 |
| 10 | 218,391,198 | 218,391,287 |
| 11 | 218,391,376 | 218,391,495 |
| 12 | 218,392,981 | 218,393,130 |
| 13 | 218,394,120 | 218,394,193 |
| 14 | 218,394,632 | 218,394,785 |
| 15 | 218,394,925 | 218,396,894 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 218,382,369 | 218,382,375 |
| 2 | CDS | 218,382,960 | 218,383,102 |
| 3 | CDS | 218,384,243 | 218,384,365 |
| 4 | CDS | 218,385,147 | 218,385,266 |
| 5 | CDS | 218,386,635 | 218,386,741 |
| 6 | CDS | 218,387,160 | 218,387,230 |
| 7 | CDS | 218,387,565 | 218,387,632 |
| 8 | CDS | 218,387,800 | 218,387,955 |
| 9 | CDS | 218,389,870 | 218,390,028 |
| 10 | CDS | 218,391,198 | 218,391,287 |
| 11 | CDS | 218,391,376 | 218,391,495 |
| 12 | CDS | 218,392,981 | 218,393,130 |
| 13 | CDS | 218,394,120 | 218,394,193 |
| 14 | CDS | 218,394,632 | 218,394,785 |
| 15 | CDS | 218,394,925 | 218,395,035 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 219,246,996 | 219,261,617 | Link |
CDS sequence
ATGACAGGTGACAAGGGTCCCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCCATCCCAGACACAAAACCGGGCACCTTCAGCCTGCGGAAGCTATGGGCCTTCACGGGGCCTGGCTTCCTCATGAGCATTGCTTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTTCTCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACGTCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGGTCTGCCATCTCTACTACCCTAAGGTGCCCCGCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTGGCGTCCTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGGAAGCTGGAAGCTTTTTTTGGACTCCTTATAACCATTATGGCCTTGACCTTTGGCTATGAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCCCTGTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAAAACCAACCAGGCTGCGTTCAACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATTTACCAGGGGGGCGTGATCCTGGGCTGCCTGTTCGGCCCCGCGGCCCTCTACATCTGGGCCATAGGTCTCCTGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGATGGAGGGCTTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCGGGACCTGAGGGACTTGTCGGGCCTCAATGATCTGCTCAACGTGCTGCAGAGCCTGCTGCTCCCGTTCGCCGTGCTGCCCATCCTCACGTTCACCAGCATGCCCACCCTCATGCAGGAGTTTGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTCCATCATGGTGCTAGTCTGCGCCATCAACCTCTACTTCGTGGTCAGCTATCTGCCCAGCCTGCCCCACCCTGCCTACTTCGGCCTTGCAGCCTTGCTGGCCGCAGCCTACCTGGGCCTCAGCACCTACCTGGTCTGGACCTGTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCACCACCACTTCCTGTATGGGCTCCTTGAAGAGGACCAGAAAGGGGAGACCTCTGGCTAG
Amino sequence
MTGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVDTFFFLFLDNYGLRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRGLFLPSCPGCGHPELLQAVGIVGAIIMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINLFVMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVAVDIYQGGVILGCLFGPAALYIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVAVFRDLRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEFANGLLNKVVTSSIMVLVCAINLYFVVSYLPSLPHPAYFGLAALLAAAYLGLSTYLVWTCCLAHGATFLAHSSHHHFLYGLLEEDQKGETSG*