ENST00000233202.11 SLC11A1
Information
- Transcript ID
- ENST00000233202.11
- Genome
- hg19
- Position
- chr2:219,246,996-219,261,617
- Strand
- +
- CDS length
- 1,653
- Amino acid length
- 551
- Gene symbol
- SLC11A1
- Gene type
- protein-coding
- Gene description
- solute carrier family 11 member 1
- Gene Entrez Gene ID
- 6556
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 219,246,996 | 219,247,098 |
| 2 | 219,247,683 | 219,247,825 |
| 3 | 219,248,966 | 219,249,088 |
| 4 | 219,249,870 | 219,249,989 |
| 5 | 219,251,358 | 219,251,464 |
| 6 | 219,251,883 | 219,251,953 |
| 7 | 219,252,288 | 219,252,355 |
| 8 | 219,252,523 | 219,252,678 |
| 9 | 219,254,593 | 219,254,751 |
| 10 | 219,255,921 | 219,256,010 |
| 11 | 219,256,099 | 219,256,218 |
| 12 | 219,257,704 | 219,257,853 |
| 13 | 219,258,843 | 219,258,916 |
| 14 | 219,259,355 | 219,259,508 |
| 15 | 219,259,648 | 219,261,617 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 219,247,092 | 219,247,098 |
| 2 | CDS | 219,247,683 | 219,247,825 |
| 3 | CDS | 219,248,966 | 219,249,088 |
| 4 | CDS | 219,249,870 | 219,249,989 |
| 5 | CDS | 219,251,358 | 219,251,464 |
| 6 | CDS | 219,251,883 | 219,251,953 |
| 7 | CDS | 219,252,288 | 219,252,355 |
| 8 | CDS | 219,252,523 | 219,252,678 |
| 9 | CDS | 219,254,593 | 219,254,751 |
| 10 | CDS | 219,255,921 | 219,256,010 |
| 11 | CDS | 219,256,099 | 219,256,218 |
| 12 | CDS | 219,257,704 | 219,257,853 |
| 13 | CDS | 219,258,843 | 219,258,916 |
| 14 | CDS | 219,259,355 | 219,259,508 |
| 15 | CDS | 219,259,648 | 219,259,758 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 218,382,273 | 218,396,894 | Link |
CDS sequence
ATGACAGGTGACAAGGGTCCCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCCATCCCAGACACAAAACCGGGCACCTTCAGCCTGCGGAAGCTATGGGCCTTCACGGGGCCTGGCTTCCTCATGAGCATTGCTTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTTCTCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACGTCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGGTCTGCCATCTCTACTACCCTAAGGTGCCCCGCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTGGCGTCCTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGGAAGCTGGAAGCTTTTTTTGGACTCCTTATAACCATTATGGCCTTGACCTTTGGCTATGAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCCCTGTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAAAACCAACCAGGCTGCGTTCAACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATTTACCAGGGGGGCGTGATCCTGGGCTGCCTGTTCGGCCCCGCGGCCCTCTACATCTGGGCCATAGGTCTCCTGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGATGGAGGGCTTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCGGGACCTGAGGGACTTGTCGGGCCTCAATGATCTGCTCAACGTGCTGCAGAGCCTGCTGCTCCCGTTCGCCGTGCTGCCCATCCTCACGTTCACCAGCATGCCCACCCTCATGCAGGAGTTTGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTCCATCATGGTGCTAGTCTGCGCCATCAACCTCTACTTCGTGGTCAGCTATCTGCCCAGCCTGCCCCACCCTGCCTACTTCGGCCTTGCAGCCTTGCTGGCCGCAGCCTACCTGGGCCTCAGCACCTACCTGGTCTGGACCTGTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCACCACCACTTCCTGTATGGGCTCCTTGAAGAGGACCAGAAAGGGGAGACCTCTGGCTAG
Amino sequence
MTGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVDTFFFLFLDNYGLRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRGLFLPSCPGCGHPELLQAVGIVGAIIMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINLFVMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVAVDIYQGGVILGCLFGPAALYIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVAVFRDLRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEFANGLLNKVVTSSIMVLVCAINLYFVVSYLPSLPHPAYFGLAALLAAAYLGLSTYLVWTCCLAHGATFLAHSSHHHFLYGLLEEDQKGETSG*