ENST00000408945.5 HMSD

Information
Transcript ID
ENST00000408945.5
Genome
hg38
Position
chr18:63,949,301-63,961,835
Strand
+
CDS length
420
Amino acid length
140
Gene symbol
HMSD
Gene type
protein-coding
Gene description
histocompatibility minor serpin domain containing
Gene Entrez Gene ID
284293
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 63,949,301 63,949,400
2 63,953,354 63,953,527
3 63,954,408 63,954,557
4 63,960,158 63,961,835
CDS
Exon number Type Start Stop
2 CDS 63,953,456 63,953,527
3 CDS 63,954,408 63,954,557
4 CDS 63,960,158 63,960,355
Other genome
Genome Chromosome Start End Links
hg19 chr18 61,616,535 61,629,069 Link
CDS sequence
ATGAGCATATCATCAGCCTTGGCCATGGTTTTCATGGGGGCAAAGGGAAACACTGCAGCTCAGATGTCTCAGGCACTTTGTTTTAGTAAAATCGGAGGTGAAGATGGAGATATTCATCGAGGTTTTCAGTCACTTCTTGTTGCAATTAACAGAACTGACACTGAATATGTGCTTAGAACTGCCAACGGGCTCTTTGGAGAAAAGTCTTATGATTTCCTCACAGGTTTTACAGATTCCTGTGGCAAATTCTACCAAGCAACGATAAAACAGCTAGACTTTGTGAATGATACAGAGAAGTCCACAACACGTGTAAACTCCTGGGTTGCTGATAAAACTAAAGGTGAAAATATATTGTTATTCTATTTCGATAATATTTTAAACAGTTTTATAGTCAGTTCTTTACAAAACTGTCAAATATAA
Amino sequence
MSISSALAMVFMGAKGNTAAQMSQALCFSKIGGEDGDIHRGFQSLLVAINRTDTEYVLRTANGLFGEKSYDFLTGFTDSCGKFYQATIKQLDFVNDTEKSTTRVNSWVADKTKGENILLFYFDNILNSFIVSSLQNCQI*