ENST00000408945.5 HMSD

Information
Transcript ID
ENST00000408945.5
Genome
hg19
Position
chr18:61,616,535-61,629,069
Strand
+
CDS length
420
Amino acid length
140
Gene symbol
HMSD
Gene type
protein-coding
Gene description
histocompatibility minor serpin domain containing
Gene Entrez Gene ID
284293
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 61,616,535 61,616,634
2 61,620,588 61,620,761
3 61,621,642 61,621,791
4 61,627,392 61,629,069
CDS
Exon number Type Start Stop
2 CDS 61,620,690 61,620,761
3 CDS 61,621,642 61,621,791
4 CDS 61,627,392 61,627,589
Other genome
Genome Chromosome Start End Links
hg38 chr18 63,949,301 63,961,835 Link
CDS sequence
ATGAGCATATCATCAGCCTTGGCCATGGTTTTCATGGGGGCAAAGGGAAACACTGCAGCTCAGATGTCTCAGGCACTTTGTTTTAGTAAAATCGGAGGTGAAGATGGAGATATTCATCGAGGTTTTCAGTCACTTCTTGTTGCAATTAACAGAACTGACACTGAATATGTGCTTAGAACTGCCAACGGGCTCTTTGGAGAAAAGTCTTATGATTTCCTCACAGGTTTTACAGATTCCTGTGGCAAATTCTACCAAGCAACGATAAAACAGCTAGACTTTGTGAATGATACAGAGAAGTCCACAACACGTGTAAACTCCTGGGTTGCTGATAAAACTAAAGGTGAAAATATATTGTTATTCTATTTCGATAATATTTTAAACAGTTTTATAGTCAGTTCTTTACAAAACTGTCAAATATAA
Amino sequence
MSISSALAMVFMGAKGNTAAQMSQALCFSKIGGEDGDIHRGFQSLLVAINRTDTEYVLRTANGLFGEKSYDFLTGFTDSCGKFYQATIKQLDFVNDTEKSTTRVNSWVADKTKGENILLFYFDNILNSFIVSSLQNCQI*