ENST00000338859.8 SMTNL2
Information
- Transcript ID
- ENST00000338859.8
- Genome
- hg38
- Position
- chr17:4,583,999-4,608,319
- Strand
- +
- CDS length
- 954
- Amino acid length
- 318
- Gene symbol
- SMTNL2
- Gene type
- protein-coding
- Gene description
- smoothelin like 2
- Gene Entrez Gene ID
- 342527
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 4,583,999 | 4,584,098 |
| 2 | 4,592,361 | 4,592,448 |
| 3 | 4,592,929 | 4,593,171 |
| 4 | 4,593,822 | 4,593,897 |
| 5 | 4,595,145 | 4,595,327 |
| 6 | 4,596,860 | 4,596,977 |
| 7 | 4,597,172 | 4,597,323 |
| 8 | 4,607,361 | 4,608,319 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 4,592,394 | 4,592,448 |
| 3 | CDS | 4,592,929 | 4,593,171 |
| 4 | CDS | 4,593,822 | 4,593,897 |
| 5 | CDS | 4,595,145 | 4,595,327 |
| 6 | CDS | 4,596,860 | 4,596,977 |
| 7 | CDS | 4,597,172 | 4,597,323 |
| 8 | CDS | 4,607,361 | 4,607,487 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 4,487,294 | 4,511,614 | Link |
CDS sequence
ATGAGAAAGACCTCAAACTCCTGCATCATGGAAAATGGGCACCAGCCGGGGGCAGGTCCAGGCGATGGACCCCCTGAGATTGCCCAAAACTTCTCAGCACCAGATCCCCCCAGGCCTCGTCCTGTGAGCCTCTCCTTGCGGCTGCCCCACCAGCCAGTCACGGCCATCACCCGAGTCTCTGACAGGTTCTCTGGGGAGACCTCAGCTGCGGCTCTATCACCCATGTCTGCTGCCACCCTGGGGGGCCTCAACCCAAGCCCCAGCGAGGTCATCACGCCCTGGACTCCCAGTCCTAGCGAGAAGAATTCCTCTTTCACGTGGTCTGTGCCAAGCTCTGGCTATGGGGCAGTGACAGCAAGCAAACACAGCAATAGCCCACCGCTGGTGACACCACCCCAGTCGCCCGTGTCCCCGCAGCCGCCAGCCATAACTCAGGTCCATCGGCAGGGGGAGCGTCGCAGGGAGCTGGTGAGGTCGCAGACGCTGCCCCGCACCTCGGAGGCGCAGGCCCGGAAAGCATTGTTTGAGAAGTGGGAGCAGGAAACGGCGGCCGGCAAGGGGAAAGGCGAGGCCCGGGCCAGGCTGAAGCGGTCGCAGAGCTTCGGCGTGGCCAGCGCCAGCAGCATCAAGCAGATCCTGCTCGAGTGGTGCCGCAGCAAGACGCTGGGCTACCAGCACGTGGACCTGCAGAACTTCTCCTCCAGCTGGAGCGACGGCATGGCCTTCTGCGCCCTGGTACACTCCTTCTTCCCCGATGCCTTTGACTACAACTCCCTGAGCCCCACGCAGAGGCAGAAGAACTTCGAGCTGGCTTTCACCATGGCCGAGAATCTGGCCAACTGTGAGCGCCTCATCGAAGTGGAGGACATGATGGTGATGGGCCGCAAGCCGGACCCCATGTGTGTCTTCACCTACGTCCAGTCGCTGTACAACCACCTGCGTCGCTTCGAGTAA
Amino sequence
MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE*