ENST00000338859.8 SMTNL2
Information
- Transcript ID
- ENST00000338859.8
- Genome
- hg19
- Position
- chr17:4,487,294-4,511,614
- Strand
- +
- CDS length
- 954
- Amino acid length
- 318
- Gene symbol
- SMTNL2
- Gene type
- protein-coding
- Gene description
- smoothelin like 2
- Gene Entrez Gene ID
- 342527
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 4,487,294 | 4,487,393 |
| 2 | 4,495,656 | 4,495,743 |
| 3 | 4,496,224 | 4,496,466 |
| 4 | 4,497,117 | 4,497,192 |
| 5 | 4,498,440 | 4,498,622 |
| 6 | 4,500,155 | 4,500,272 |
| 7 | 4,500,467 | 4,500,618 |
| 8 | 4,510,656 | 4,511,614 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 4,495,689 | 4,495,743 |
| 3 | CDS | 4,496,224 | 4,496,466 |
| 4 | CDS | 4,497,117 | 4,497,192 |
| 5 | CDS | 4,498,440 | 4,498,622 |
| 6 | CDS | 4,500,155 | 4,500,272 |
| 7 | CDS | 4,500,467 | 4,500,618 |
| 8 | CDS | 4,510,656 | 4,510,782 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 4,583,999 | 4,608,319 | Link |
CDS sequence
ATGAGAAAGACCTCAAACTCCTGCATCATGGAAAATGGGCACCAGCCGGGGGCAGGTCCAGGCGATGGACCCCCTGAGATTGCCCAAAACTTCTCAGCACCAGATCCCCCCAGGCCTCGTCCTGTGAGCCTCTCCTTGCGGCTGCCCCACCAGCCAGTCACGGCCATCACCCGAGTCTCTGACAGGTTCTCTGGGGAGACCTCAGCTGCGGCTCTATCACCCATGTCTGCTGCCACCCTGGGGGGCCTCAACCCAAGCCCCAGCGAGGTCATCACGCCCTGGACTCCCAGTCCTAGCGAGAAGAATTCCTCTTTCACGTGGTCTGTGCCAAGCTCTGGCTATGGGGCAGTGACAGCAAGCAAACACAGCAATAGCCCACCGCTGGTGACACCACCCCAGTCGCCCGTGTCCCCGCAGCCGCCAGCCATAACTCAGGTCCATCGGCAGGGGGAGCGTCGCAGGGAGCTGGTGAGGTCGCAGACGCTGCCCCGCACCTCGGAGGCGCAGGCCCGGAAAGCATTGTTTGAGAAGTGGGAGCAGGAAACGGCGGCCGGCAAGGGGAAAGGCGAGGCCCGGGCCAGGCTGAAGCGGTCGCAGAGCTTCGGCGTGGCCAGCGCCAGCAGCATCAAGCAGATCCTGCTCGAGTGGTGCCGCAGCAAGACGCTGGGCTACCAGCACGTGGACCTGCAGAACTTCTCCTCCAGCTGGAGCGACGGCATGGCCTTCTGCGCCCTGGTACACTCCTTCTTCCCCGATGCCTTTGACTACAACTCCCTGAGCCCCACGCAGAGGCAGAAGAACTTCGAGCTGGCTTTCACCATGGCCGAGAATCTGGCCAACTGTGAGCGCCTCATCGAAGTGGAGGACATGATGGTGATGGGCCGCAAGCCGGACCCCATGTGTGTCTTCACCTACGTCCAGTCGCTGTACAACCACCTGCGTCGCTTCGAGTAA
Amino sequence
MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE*