ENST00000623247.3 CLEC20A

Information
Transcript ID
ENST00000623247.3
Genome
hg38
Position
chr1:178,479,240-178,496,964
Strand
-
CDS length
1,203
Amino acid length
401
Gene symbol
CLEC20A
Gene type
protein-coding
Gene description
C-type lectin domain containing 20A
Gene Entrez Gene ID
400797
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 178,479,240 178,479,615
7 178,482,312 178,482,397
6 178,483,175 178,483,282
5 178,488,501 178,488,599
4 178,490,072 178,490,437
3 178,492,501 178,492,566
2 178,494,454 178,494,810
1 178,496,900 178,496,964
CDS
Exon number Type Start Stop
8 CDS 178,479,535 178,479,615
7 CDS 178,482,312 178,482,397
6 CDS 178,483,175 178,483,282
5 CDS 178,488,501 178,488,599
4 CDS 178,490,072 178,490,437
3 CDS 178,492,501 178,492,566
2 CDS 178,494,454 178,494,810
1 CDS 178,496,900 178,496,939
Other genome
Genome Chromosome Start End Links
hg19 chr1 178,448,375 178,466,099 Link
CDS sequence
ATGCTGCCCCGGGCGCTGCTGCTCTCCTTCTGCGCAGCAGCCCTGCAGCTGGTGAGCAGTAAGAGGGACTTGGTTCTGGTGAAGGAGGCGCTGAGCTGGTACGACGCCCAGCAGCACTGCCGGCTGCACTACACAGACCTCGCTGACCTGCAGCCAAGTGGCCTGTGGAAGCTCTACTCCCTCATGACCAGCACCCCGGCTTGGATTGGCCTCTTCTTCGACGCAAGCACTTCTGGCCTGAGATGGTCCAGCGGCTCCACCTTCACAGCCCTGGAGTGGGGCCAGAAGCTACCTGAATTTGGGGTGGGCTTCTGTGCCACGCTGTACACTTGGCTGAAATTACCCAGCATAGGGGCTGCCTCCTGCACAGCCCAGAAGCCCTTCCTCTGCTACTGTGACCCTGACGTCGGGCACCTCATCTCCACGAAGCCCTCTCTCAGCCTGACCACCTCTCCAAAGCCAGCTGTGGTCCAGATCAGTGGTCAGACCTTCATGCGATTTGACCAAGTGATGACATGGTCCTCGGCCCTGCTGTACTGCCGCAGCCACCACACGGATCTGGCCGACCTGCAGATGGTGACGGATGAGACAGGCAAGGAGGCCTTGAGATCCATCATGAGTGAGACTGAAGCCTGGATTGGCCTCTACCTCAATGCAAACTCCGGATCTCTGAGCTGGTCCAGTGACCTGGGGGCCAGCATCCCCTCCTGGCTGCAGGTGCCGATGATGGTGAGAGGACTGTGCACAGCTCTTGGCATCTATATGACCTACTCCCCAAAAGTGTACTCAGTGAACTGCTCTTCCCTGCTGCCCTTCTTCTGCTTCTATGACTCCTCCACTGGACACCGGGCATCAGCAGAGTTGCCTCCACTCTTCCACACTTCCCCCACAGAAATGACAGAGGAAACAACTCCCAGGCCAGGCAGAGCTGTGGCCAGTGTAGGGAGTGGCACTGATAGAAGAGATACAGCTGCTGCCACGGAGGCCCAACATCTGAGTTCAGAATCTAAAGAAAAAACATCAGCACAAAAATCAGGGCACCCTTTTGGAATCTTGAAAGCAGACTTTACCATCTCAACTCTGATGGACCCAGAAGAGATGAAAGACCAATTTCTGAGACAGATCCAGGAAGTCTTAAAGCTTACATTAGGTCACGAACAATTTAGACTGAAATGGGTCAGCTTCGAAGTGAACAAAAAATAG
Amino sequence
MLPRALLLSFCAAALQLVSSKRDLVLVKEALSWYDAQQHCRLHYTDLADLQPSGLWKLYSLMTSTPAWIGLFFDASTSGLRWSSGSTFTALEWGQKLPEFGVGFCATLYTWLKLPSIGAASCTAQKPFLCYCDPDVGHLISTKPSLSLTTSPKPAVVQISGQTFMRFDQVMTWSSALLYCRSHHTDLADLQMVTDETGKEALRSIMSETEAWIGLYLNANSGSLSWSSDLGASIPSWLQVPMMVRGLCTALGIYMTYSPKVYSVNCSSLLPFFCFYDSSTGHRASAELPPLFHTSPTEMTEETTPRPGRAVASVGSGTDRRDTAAATEAQHLSSESKEKTSAQKSGHPFGILKADFTISTLMDPEEMKDQFLRQIQEVLKLTLGHEQFRLKWVSFEVNKK*