ENST00000623247.3 CLEC20A

Information
Transcript ID
ENST00000623247.3
Genome
hg19
Position
chr1:178,448,375-178,466,099
Strand
-
CDS length
1,203
Amino acid length
401
Gene symbol
CLEC20A
Gene type
protein-coding
Gene description
C-type lectin domain containing 20A
Gene Entrez Gene ID
400797
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 178,448,375 178,448,750
7 178,451,447 178,451,532
6 178,452,310 178,452,417
5 178,457,636 178,457,734
4 178,459,207 178,459,572
3 178,461,636 178,461,701
2 178,463,589 178,463,945
1 178,466,035 178,466,099
CDS
Exon number Type Start Stop
8 CDS 178,448,670 178,448,750
7 CDS 178,451,447 178,451,532
6 CDS 178,452,310 178,452,417
5 CDS 178,457,636 178,457,734
4 CDS 178,459,207 178,459,572
3 CDS 178,461,636 178,461,701
2 CDS 178,463,589 178,463,945
1 CDS 178,466,035 178,466,074
Other genome
Genome Chromosome Start End Links
hg38 chr1 178,479,240 178,496,964 Link
CDS sequence
ATGCTGCCCCGGGCGCTGCTGCTCTCCTTCTGCGCAGCAGCCCTGCAGCTGGTGAGCAGTAAGAGGGACTTGGTTCTGGTGAAGGAGGCGCTGAGCTGGTACGACGCCCAGCAGCACTGCCGGCTGCACTACACAGACCTCGCTGACCTGCAGCCAAGTGGCCTGTGGAAGCTCTACTCCCTCATGACCAGCACCCCGGCTTGGATTGGCCTCTTCTTCGACGCAAGCACTTCTGGCCTGAGATGGTCCAGCGGCTCCACCTTCACAGCCCTGGAGTGGGGCCAGAAGCTACCTGAATTTGGGGTGGGCTTCTGTGCCACGCTGTACACTTGGCTGAAATTACCCAGCATAGGGGCTGCCTCCTGCACAGCCCAGAAGCCCTTCCTCTGCTACTGTGACCCTGACGTCGGGCACCTCATCTCCACGAAGCCCTCTCTCAGCCTGACCACCTCTCCAAAGCCAGCTGTGGTCCAGATCAGTGGTCAGACCTTCATGCGATTTGACCAAGTGATGACATGGTCCTCGGCCCTGCTGTACTGCCGCAGCCACCACACGGATCTGGCCGACCTGCAGATGGTGACGGATGAGACAGGCAAGGAGGCCTTGAGATCCATCATGAGTGAGACTGAAGCCTGGATTGGCCTCTACCTCAATGCAAACTCCGGATCTCTGAGCTGGTCCAGTGACCTGGGGGCCAGCATCCCCTCCTGGCTGCAGGTGCCGATGATGGTGAGAGGACTGTGCACAGCTCTTGGCATCTATATGACCTACTCCCCAAAAGTGTACTCAGTGAACTGCTCTTCCCTGCTGCCCTTCTTCTGCTTCTATGACTCCTCCACTGGACACCGGGCATCAGCAGAGTTGCCTCCACTCTTCCACACTTCCCCCACAGAAATGACAGAGGAAACAACTCCCAGGCCAGGCAGAGCTGTGGCCAGTGTAGGGAGTGGCACTGATAGAAGAGATACAGCTGCTGCCACGGAGGCCCAACATCTGAGTTCAGAATCTAAAGAAAAAACATCAGCACAAAAATCAGGGCACCCTTTTGGAATCTTGAAAGCAGACTTTACCATCTCAACTCTGATGGACCCAGAAGAGATGAAAGACCAATTTCTGAGACAGATCCAGGAAGTCTTAAAGCTTACATTAGGTCACGAACAATTTAGACTGAAATGGGTCAGCTTCGAAGTGAACAAAAAATAG
Amino sequence
MLPRALLLSFCAAALQLVSSKRDLVLVKEALSWYDAQQHCRLHYTDLADLQPSGLWKLYSLMTSTPAWIGLFFDASTSGLRWSSGSTFTALEWGQKLPEFGVGFCATLYTWLKLPSIGAASCTAQKPFLCYCDPDVGHLISTKPSLSLTTSPKPAVVQISGQTFMRFDQVMTWSSALLYCRSHHTDLADLQMVTDETGKEALRSIMSETEAWIGLYLNANSGSLSWSSDLGASIPSWLQVPMMVRGLCTALGIYMTYSPKVYSVNCSSLLPFFCFYDSSTGHRASAELPPLFHTSPTEMTEETTPRPGRAVASVGSGTDRRDTAAATEAQHLSSESKEKTSAQKSGHPFGILKADFTISTLMDPEEMKDQFLRQIQEVLKLTLGHEQFRLKWVSFEVNKK*