ENST00000310441.12 HCFC1

Information
Transcript ID
ENST00000310441.12
Genome
hg19
Position
chrX:153,213,008-153,237,269
Strand
-
CDS length
6,108
Amino acid length
2,036
Gene symbol
HCFC1
Gene type
protein-coding
Gene description
host cell factor C1
Gene Entrez Gene ID
3054
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
26 153,213,008 153,214,837
25 153,215,004 153,215,067
24 153,215,694 153,215,994
23 153,216,264 153,216,449
22 153,216,801 153,216,938
21 153,217,040 153,217,158
20 153,217,292 153,217,609
19 153,217,965 153,218,409
18 153,219,058 153,219,221
17 153,219,517 153,220,993
16 153,221,642 153,221,862
15 153,222,076 153,222,214
14 153,222,369 153,222,511
13 153,222,765 153,222,984
12 153,223,233 153,223,337
11 153,223,476 153,223,700
10 153,224,020 153,224,217
9 153,224,782 153,224,942
8 153,225,253 153,225,612
7 153,225,686 153,225,865
6 153,226,993 153,227,099
5 153,227,673 153,227,757
4 153,228,676 153,228,884
3 153,229,575 153,229,735
2 153,230,029 153,230,177
1 153,236,099 153,237,269
CDS
Exon number Type Start Stop
26 CDS 153,214,798 153,214,837
25 CDS 153,215,004 153,215,067
24 CDS 153,215,694 153,215,994
23 CDS 153,216,264 153,216,449
22 CDS 153,216,801 153,216,938
21 CDS 153,217,040 153,217,158
20 CDS 153,217,292 153,217,609
19 CDS 153,217,965 153,218,409
18 CDS 153,219,058 153,219,221
17 CDS 153,219,517 153,220,993
16 CDS 153,221,642 153,221,862
15 CDS 153,222,076 153,222,214
14 CDS 153,222,369 153,222,511
13 CDS 153,222,765 153,222,984
12 CDS 153,223,233 153,223,337
11 CDS 153,223,476 153,223,700
10 CDS 153,224,020 153,224,217
9 CDS 153,224,782 153,224,942
8 CDS 153,225,253 153,225,612
7 CDS 153,225,686 153,225,865
6 CDS 153,226,993 153,227,099
5 CDS 153,227,673 153,227,757
4 CDS 153,228,676 153,228,884
3 CDS 153,229,575 153,229,735
2 CDS 153,230,029 153,230,177
1 CDS 153,236,099 153,236,291
Other genome
Genome Chromosome Start End Links
hg38 chrX 153,947,557 153,971,818 Link
CDS sequence
ATGGCTTCGGCCGTGTCGCCCGCCAACTTGCCAGCGGTGCTTCTGCAGCCCCGCTGGAAGCGAGTGGTGGGCTGGTCGGGTCCGGTGCCACGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATCGTGGTGTTTGGCGGCGGCAACGAGGGAATAGTGGACGAACTGCACGTGTACAACACGGCAACCAACCAGTGGTTCATCCCAGCCGTGAGGGGGGACATTCCCCCTGGGTGTGCAGCCTATGGCTTCGTGTGTGACGGGACTCGCCTCCTGGTGTTTGGTGGGATGGTGGAGTATGGGAAATACAGCAATGACCTCTACGAACTCCAGGCGAGCCGGTGGGAGTGGAAGAGACTCAAAGCAAAGACGCCCAAAAACGGGCCCCCTCCGTGTCCTCGACTCGGGCACAGCTTCTCCCTTGTGGGCAACAAATGCTACCTGTTTGGGGGTCTGGCCAATGATAGCGAGGACCCAAAGAACAACATTCCAAGGTACCTGAATGACTTATATATCCTGGAATTACGGCCAGGCTCTGGAGTGGTAGCCTGGGACATTCCCATCACTTACGGGGTCCTACCACCACCCCGGGAGTCACATACTGCCGTGGTCTACACCGAAAAAGACAATAAGAAGTCCAAGCTGGTGATCTACGGCGGGATGAGTGGCTGCAGGCTGGGGGACCTGTGGACCCTAGATATTGACACCCTGACGTGGAATAAGCCCAGTCTCAGCGGGGTGGCGCCTCTTCCTCGCAGTCTCCACTCGGCAACCACCATCGGAAATAAAATGTACGTGTTTGGTGGCTGGGTGCCTCTCGTCATGGATGACGTCAAAGTGGCCACACACGAGAAGGAGTGGAAGTGTACCAACACGCTGGCTTGTCTCAACCTGGATACCATGGCCTGGGAGACCATCCTGATGGATACACTGGAGGACAACATCCCCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCATCAACACCCGCCTGTACATTTGGAGTGGGCGTGACGGCTACCGCAAGGCCTGGAACAACCAGGTCTGCTGCAAGGACCTCTGGTACCTAGAGACAGAAAAGCCACCACCCCCAGCCCGAGTACAACTGGTACGCGCCAACACCAACTCCCTGGAGGTGAGCTGGGGGGCAGTGGCAACAGCCGACAGCTACCTTCTCCAGCTCCAGAAATATGACATTCCTGCCACGGCTGCTACTGCCACCTCCCCTACACCCAATCCGGTCCCATCTGTGCCTGCCAACCCTCCCAAGAGCCCTGCCCCAGCAGCAGCCGCACCTGCTGTGCAGCCGCTGACCCAAGTAGGCATCACGCTCCTGCCCCAGGCTGCCCCCGCACCCCCGACCACCACCACCATCCAGGTCTTGCCAACGGTGCCTGGCAGCTCCATTTCTGTGCCCACCGCAGCCAGGACTCAAGGTGTCCCTGCTGTTCTCAAAGTGACCGGTCCTCAGGCTACAACAGGAACTCCATTGGTCACCATGCGACCTGCCAGCCAGGCTGGGAAAGCCCCTGTCACCGTGACCTCCCTTCCCGCCGGAGTGCGGATGGTTGTGCCAACACAGAGTGCCCAGGGAACGGTGATTGGCAGTAGCCCACAGATGAGTGGGATGGCCGCACTGGCCGCTGCGGCCGCTGCCACCCAGAAGATCCCCCCTTCCTCGGCACCCACGGTGCTGAGTGTCCCAGCGGGTACCACCATCGTGAAGACCATGGCTGTGACACCTGGCACTACCACCCTCCCAGCCACTGTGAAGGTGGCCTCCTCGCCAGTCATGGTGAGCAACCCTGCCACTCGCATGCTGAAGACTGCAGCCGCCCAGGTGGGGACATCGGTTTCCTCCGCCACCAACACGTCTACCCGCCCTATCATCACAGTGCACAAGTCAGGCACTGTGACAGTGGCCCAGCAAGCCCAGGTGGTGACCACAGTTGTGGGCGGGGTCACCAAGACCATCACCCTGGTGAAGAGCCCCATCTCTGTCCCAGGAGGCAGTGCTCTGATTTCCAATCTGGGCAAAGTGATGTCGGTGGTCCAGACCAAACCAGTTCAGACTTCAGCAGTCACAGGCCAGGCGTCCACGGGTCCTGTGACTCAGATCATCCAGACCAAAGGGCCCCTGCCAGCGGGAACAATCCTGAAGCTGGTGACCTCAGCAGATGGCAAGCCCACCACCATCATCACTACCACGCAGGCCAGTGGGGCGGGGACCAAGCCCACCATCCTGGGCATCAGCAGCGTCTCCCCCAGTACCACCAAGCCCGGCACGACCACCATCATCAAAACCATCCCCATGTCGGCCATCATCACCCAGGCGGGCGCCACGGGTGTGACCAGCAGTCCTGGCATCAAGTCCCCCATCACCATCATCACCACCAAGGTGATGACTTCAGGAACTGGAGCACCTGCGAAAATCATCACTGCTGTCCCCAAAATTGCCACTGGCCACGGGCAGCAGGGAGTGACCCAGGTGGTGCTTAAGGGGGCCCCGGGACAGCCAGGCACCATCCTCCGCACTGTGCCCATGGGGGGTGTTCGCCTGGTCACACCCGTCACCGTCTCCGCCGTCAAGCCAGCCGTCACCACGTTGGTTGTGAAAGGCACCACAGGTGTCACGACCCTAGGCACAGTGACAGGCACCGTCTCCACCAGCCTTGCCGGGGCGGGGGGCCACAGCACTAGTGCTTCCCTGGCCACGCCCATCACCACCTTGGGCACCATTGCCACCCTCTCAAGCCAGGTGATCAACCCCACTGCCATCACTGTGTCGGCCGCACAGACCACGCTGACAGCGGCAGGCGGGCTCACAACCCCAACCATCACCATGCAGCCCGTGTCCCAGCCCACCCAGGTAACTCTGATCACGGCACCTAGTGGGGTGGAGGCCCAGCCTGTGCATGACCTCCCTGTGTCCATTCTGGCCTCCCCGACTACAGAACAGCCCACCGCCACAGTTACCATCGCCGACTCAGGCCAGGGTGATGTGCAGCCTGGCACTGTCACCTTGGTGTGCTCCAACCCACCCTGTGAGACCCACGAGACTGGCACCACCAACACGGCCACCACTACTGTTGTGGCTAACCTTGGGGGACACCCCCAGCCCACCCAAGTGCAGTTCGTCTGTGACAGACAGGAGGCAGCTGCTTCTCTTGTGACCTCGACTGTGGGCCAGCAGAATGGTAGCGTGGTCCGAGTCTGTTCGAACCCGCCCTGCGAGACCCACGAGACGGGCACCACCAACACCGCCACCACCGCCACCTCCAACATGGCCGGGCAGCATGGCTGCTCAAACCCACCCTGCGAGACCCACGAGACGGGCACCACCAACACTGCCACTACAGCCATGTCGAGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCGGGCCTGTGCAGCTGGCACCCCTGCCGTGATCCGGATCAGTGTGGCCACTGGGGCGCTGGAGGCAGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGACTGTGATGGCCACCGGGGCCCCGTGCTCGGCCGGCCCACTCCTTGGGCCGAGCATGGCACGGGAGCCCGGGGGCCGCAGCCCTGCTTTTGTGCAGTTGGCCCCTCTGAGCAGCAAAGTCAGGCTGAGCAGCCCAAGCATTAAGGACCTTCCTGCGGGGCGCCACAGCCATGCGGTCAGCACCGCTGCCATGACCCGTTCCAGCGTGGGTGCTGGGGAGCCCCGCATGGCACCTGTGTGCGAGAGCCTCCAGGGTGGCTCGCCCAGCACCACAGTGACTGTGACAGCCCTGGAGGCACTGCTGTGCCCCTCGGCCACCGTGACCCAAGTCTGCTCCAACCCACCATGTGAGACCCACGAGACAGGCACCACCAACACCGCCACTACCTCGAATGCAGGCAGCGCCCAGAGGGTGTGCTCCAACCCGCCATGCGAGACCCACGAGACGGGCACCACCCACACGGCCACCACCGCTACTTCAAACGGGGGCACGGGCCAGCCCGAGGGTGGGCAGCAGCCCCCTGCTGGTCGCCCCTGTGAGACACACCAGACCACTTCCACTGGCACCACCATGTCGGTCAGCGTGGGTGCCCTGCTTCCCGACGCCACTTCTTCCCACAGGACCGTGGAGTCTGGCCTAGAGGTGGCGGCGGCACCCAGCGTCACCCCCCAGGCTGGCACCGCGCTGCTGGCTCCTTTCCCAACACAGAGGGTGTGCTCCAACCCCCCCTGTGAGACCCACGAGACGGGCACCACTCACACGGCCACCACTGTCACTTCCAACATGAGTTCAAACCAAGACCCCCCACCTGCTGCCAGCGATCAGGGAGAGGTGGAGAGCACCCAGGGCGACAGCGTGAACATCACCAGCTCCAGTGCCATCACGACAACCGTGTCCTCCACACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTGTGCCGCCCCCAGAGGAACTCCAGGTGTCGCCAGGTCCTCGCCAGCAGCTGCCGCCACGGCAGCTTCTGCAGTCGGCTTCCACAGCCCTGATGGGGGAGTCCGCCGAGGTCCTGTCAGCCTCCCAGACCCCTGAGCTCCCGGCCGCCGTGGATCTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAGTCTGCCGGCTCTGCGGTGGTGGCCACTGTGGTGGTCCAGCCACCCCCACCCACACAGTCCGAAGTAGACCAGTTATCACTTCCCCAAGAGCTAATGGCCGAGGCCCAAGCTGGCACCACCACCCTCATGGTAACGGGGCTCACCCCCGAGGAGCTGGCAGTGACGGCTGCTGCAGAAGCAGCTGCCCAGGCCGCAGCCACGGAGGAAGCCCAGGCCCTGGCCATCCAGGCGGTGCTCCAGGCCGCGCAGCAGGCCGTCATGGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCCGAGGGTCAGGAGGGCCAGGCCACCACCATACCCATTGTGCTGACACAGCAGGAGCTGGCTGCCCTGGTGCAGCAGCAGCAGCTGCAGGAGGCCCAGGCCCAGCAGCAGCATCACCACCTCCCCACTGAGGCCCTGGCCCCTGCCGACAGTCTCAACGACCCAGCCATTGAGAGCAATTGCCTCAATGAGCTGGCCGGCACGGTCCCCAGCACTGTGGCGCTGCTGCCCTCAACGGCCACTGAGAGCCTGGCTCCATCCAACACATTTGTGGCCCCCCAGCCGGTTGTGGTGGCCAGCCCAGCCAAGCTGCAGGCTGCAGCTACCCTGACCGAAGTGGCCAATGGCATCGAGTCCCTGGGTGTGAAGCCAGACCTGCCGCCCCCACCCAGCAAAGCCCCCATGAAGAAGGAAAACCAGTGGTTTGATGTGGGAGTCATTAAGGGCACCAATGTAATGGTGACACACTATTTCCTGCCACCAGATGATGCTGTCCCATCAGACGATGATTTGGGCACCGTCCCTGACTATAACCAGCTGAAGAAGCAGGAGCTGCAGCCAGGCACAGCCTATAAGTTTCGTGTTGCCGGAATCAATGCCTGTGGCCGGGGGCCCTTCAGCGAAATCTCAGCCTTTAAGACGTGCCTGCCTGGTTTCCCAGGGGCCCCTTGTGCCATTAAAATCAGCAAAAGTCCGGATGGTGCTCACCTCACCTGGGAGCCACCCTCTGTGACCTCCGGCAAGATTATCGAGTACTCCGTGTACCTGGCCATCCAGAGCTCACAGGCTGGGGGCGAGCTCAAGAGCTCCACCCCGGCCCAGCTGGCCTTCATGCGGGTGTACTGCGGGCCCAGCCCCTCCTGCCTGGTGCAGTCCTCCAGCCTTTCCAACGCCCACATCGACTACACCACCAAGCCCGCCATCATCTTCCGCATCGCCGCCCGCAATGAGAAGGGCTATGGCCCGGCCACACAAGTGAGGTGGCTGCAGGAAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAATCTGCTCCAAAGAAATCTAAGGCCGATGGTCAGTGA
Amino sequence
MASAVSPANLPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIDTLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLETEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVPGSSISVPTAARTQGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSSPQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTMAVTPGTTTLPATVKVASSPVMVSNPATRMLKTAAAQVGTSVSSATNTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQAGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGHSTSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQVTLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCETHETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVTSTVGQQNGSVVRVCSNPPCETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTNTATTAMSSVGANHQRDARRACAAGTPAVIRISVATGALEAAQGSKSQCQTRQTSATSTTMTVMATGAPCSAGPLLGPSMAREPGGRSPAFVQLAPLSSKVRLSSPSIKDLPAGRHSHAVSTAAMTRSSVGAGEPRMAPVCESLQGGSPSTTVTVTALEALLCPSATVTQVCSNPPCETHETGTTNTATTSNAGSAQRVCSNPPCETHETGTTHTATTATSNGGTGQPEGGQQPPAGRPCETHQTTSTGTTMSVSVGALLPDATSSHRTVESGLEVAAAPSVTPQAGTALLAPFPTQRVCSNPPCETHETGTTHTATTVTSNMSSNQDPPPAASDQGEVESTQGDSVNITSSSAITTTVSSTLTRAVTTVTQSTPVPGPSVPPPEELQVSPGPRQQLPPRQLLQSASTALMGESAEVLSASQTPELPAAVDLSSTGEPSSGQESAGSAVVATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMGTGEPMDTSEAAATVTQAELGHLSAEGQEGQATTIPIVLTQQELAALVQQQQLQEAQAQQQHHHLPTEALAPADSLNDPAIESNCLNELAGTVPSTVALLPSTATESLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPDLPPPPSKAPMKKENQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDSSGTKPANKRPMSSPEMKSAPKKSKADGQ*