HCFC1 host cell factor C1

Information
Symbol
HCFC1
Type
protein-coding
Description
host cell factor C1
Entrez Gene ID
3054
Genome
hg19
Position
chrX:153,213,010-153,236,635
Genome
hg38
Position
chrX:153,947,559-153,971,184
MIM
300019 OMIM
HGNC
HGNC:4839 HGNC
Ensembl
ENSG00000172534 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Pathogenic 0 14
Likely pathogenic 1 6
Benign 0 554
Likely benign 0 1,506
Conflicting classifications of pathogenicity 0 88
not provided 8 6
Uncertain significance 0 470
Ranking
ClinVar
0
0
354
2,038
12
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM CFF
SYNONYM HCF
SYNONYM HCF-1
SYNONYM HCF1
SYNONYM HFC1
SYNONYM MAHCX
SYNONYM MRX3
SYNONYM PPP1R89
SYNONYM VCAF
SYNONYM XLID3
MIM 300019 OMIM
HGNC HGNC:4839 HGNC
Ensembl ENSG00000172534 Ensembl
AllianceGenome HGNC:4839
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000310441.12 hg38 chrX 153,947,557 153,971,818 24,262
ENST00000369984.4 hg38 chrX 153,947,559 153,971,184 23,626
ENST00000310441.12 hg19 chrX 153,213,008 153,237,269 24,262
ENST00000369984.4 hg19 chrX 153,213,010 153,236,635 23,626
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