ENST00000535601.5 HTATSF1
Information
- Transcript ID
- ENST00000535601.5
- Genome
- hg19
- Position
- chrX:135,579,238-135,594,501
- Strand
- +
- CDS length
- 2,268
- Amino acid length
- 756
- Gene symbol
- HTATSF1
- Gene type
- protein-coding
- Gene description
- HIV-1 Tat specific factor 1
- Gene Entrez Gene ID
- 27336
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 135,579,238 | 135,579,598 |
| 2 | 135,579,783 | 135,580,029 |
| 3 | 135,581,757 | 135,581,937 |
| 4 | 135,582,317 | 135,582,364 |
| 5 | 135,582,823 | 135,582,977 |
| 6 | 135,584,937 | 135,585,100 |
| 7 | 135,586,523 | 135,586,622 |
| 8 | 135,591,250 | 135,591,339 |
| 9 | 135,592,241 | 135,592,378 |
| 10 | 135,592,967 | 135,594,501 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 135,579,844 | 135,580,029 |
| 3 | CDS | 135,581,757 | 135,581,937 |
| 4 | CDS | 135,582,317 | 135,582,364 |
| 5 | CDS | 135,582,823 | 135,582,977 |
| 6 | CDS | 135,584,937 | 135,585,100 |
| 7 | CDS | 135,586,523 | 135,586,622 |
| 8 | CDS | 135,591,250 | 135,591,339 |
| 9 | CDS | 135,592,241 | 135,592,378 |
| 10 | CDS | 135,592,967 | 135,594,172 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chrX | 136,497,079 | 136,512,342 | Link |
CDS sequence
ATGAGCGGCACCAACTTGGATGGGAACGATGAGTTTGATGAGCAGTTGCGAATGCAAGAATTGTACGGAGACGGCAAGGATGGTGACACCCAGACCGATGCCGGCGGAGAACCCGATTCTCTCGGGCAGCAGCCGACGGACACTCCCTACGAGTGGGACCTGGACAAAAAGGCTTGGTTCCCCAAGATTACTGAAGATTTCATTGCTACATATCAGGCCAATTATGGCTTCTCTAACGATGGCGCATCTAGTTCTACCGCAAATGTTGAAGATGTCCATGCTAGGACTGCAGAGGAACCTCCACAAGAAAAAGCCCCGGAACCCACTGATGCCAGAAAGAAGGGAGAAAAAAGAAAGGCTGAGTCAGGATGGTTTCATGTTGAAGAAGACAGAAATACAAATGTATACGTGTCTGGTTTGCCTCCAGATATTACAGTGGATGAATTTATACAACTTATGTCCAAGTTTGGCATTATTATGAGAGATCCTCAGACAGAAGAATTTAAGGTCAAACTTTACAAAGATAATCAAGGAAATCTTAAAGGAGACGGTCTTTGCTGTTATTTGAAAAGAGAATCTGTGGAACTTGCATTAAAACTTTTGGATGAAGATGAAATTAGAGGCTACAAATTACATGTTGAGGTGGCAAAGTTTCAACTGAAGGGAGAATATGATGCCTCAAAGAAGAAGAAGAAGTGCAAAGACTATAAGAAGAAGCTGTCTATGCAACAAAAGCAGTTGGATTGGAGACCTGAGAGGCGAGCCGGACCATCCCGGATGCGCCATGAGCGAGTTGTCATCATCAAGAATATGTTTCATCCTATGGATTTTGAGGATGATCCGTTGGTGCTGAATGAGATCAGAGAAGACCTTCGAGTAGAGTGTTCGAAGTTTGGACAAATTAGGAAACTCCTTCTCTTTGATAGGCACCCAGATGGTGTGGCCTCTGTGTCCTTTCGGGATCCAGAGGAAGCTGATTATTGTATTCAGACTCTCGATGGAAGATGGTTTGGTGGCCGTCAAATCACTGCCCAGGCATGGGATGGGACTACAGATTATCAGGTGGAGGAAACCTCAAGAGAAAGGGAGGAAAGGCTGAGAGGATGGGAGGCTTTCCTCAATGCTCCTGAGGCCAACAGAGGCCTTAGGCGTTCAGATTCTGTCTCTGCTTCCGAAAGGGCAGGGCCTTCTAGAGCAAGGCATTTTTCAGAGCACCCCAGCACATCTAAAATGAATGCTCAAGAAACTGCAACTGGAATGGCGTTTGAAGAACCTATAGATGAGAAGAAGTTTGAAAAGACAGAAGATGGGGGAGAATTTGAAGAAGGTGCTTCTGAAAACAATGCTAAGGAAAGTAGCCCCGAAAAAGAGGCTGAAGAAGGCTGCCCTGAAAAAGAATCTGAAGAGGGCTGCCCCAAAAGAGGGTTTGAAGGCAGCTGCTCCCAAAAAGAGTCTGAAGAAGGCAATCCCGTAAGAGGATCTGAAGAGGATAGTCCTAAAAAAGAGTCTAAAAAGAAGACACTCAAAAATGATTGTGAAGAGAATGGCCTTGCAAAGGAATCTGAAGATGACCTCAACAAGGAGTCTGAAGAGGAGGTTGGCCCCACAAAAGAGTCCGAAGAAGATGACTCAGAGAAAGAGTCTGATGAAGACTGCTCTGAAAAACAGTCTGAAGATGGCTCCGAAAGAGAATTTGAAGAAAATGGTCTCGAGAAAGATTTGGACGAGGAAGGTTCTGAAAAGGAGCTTCATGAAAATGTTCTTGACAAAGAGTTAGAAGAAAATGACTCTGAAAACTCCGAATTTGAAGATGACGGCTCTGAAAAAGTGTTAGATGAGGAAGGCTCTGAGAGAGAGTTTGACGAAGATTCAGATGAAAAGGAAGAAGAGGAGGATACATATGAAAAAGTATTTGATGATGAGTCTGATGAGAAAGAGGATGAAGAATATGCAGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAGAAGGTGATGCAGATGAAAAGCTGTTTGAAGAGTCAGATGACAAGGAAGATGAAGATGCAGATGGAAAGGAAGTTGAAGATGCTGACGAAAAGTTGTTCGAAGATGATGATTCCAATGAGAAGTTGTTTGATGAGGAGGAAGATTCCAGTGAGAAGTTGTTTGACGATTCTGATGAGAGGGGGACTTTGGGTGGTTTTGGGAGTGTTGAAGAAGGGCCCCTATCCACTGGCAGCAGCTTTATTCTCAGTAGCGATGATGATGACGATGATATTTAA
Amino sequence
MSGTNLDGNDEFDEQLRMQELYGDGKDGDTQTDAGGEPDSLGQQPTDTPYEWDLDKKAWFPKITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEKAPEPTDARKKGEKRKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFSEHPSTSKMNAQETATGMAFEEPIDEKKFEKTEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPKRGFEGSCSQKESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEEEDSSEKLFDDSDERGTLGGFGSVEEGPLSTGSSFILSSDDDDDDI*