HTATSF1 HIV-1 Tat specific factor 1

Information
Symbol
HTATSF1
Type
protein-coding
Description
HIV-1 Tat specific factor 1
Entrez Gene ID
27336
Genome
hg19
Position
chrX:135,579,751-135,594,505
Genome
hg38
Position
chrX:136,497,592-136,512,346
MIM
300346 OMIM
HGNC
HGNC:5276 HGNC
Ensembl
ENSG00000102241 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Likely benign 0 6
Conflicting classifications of pathogenicity 0 2
not provided 6 0
Uncertain significance 0 42
Ranking
ClinVar
0
0
0
48
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM TAT-SF1
SYNONYM TATSF1
SYNONYM dJ196E23.2
MIM 300346 OMIM
HGNC HGNC:5276 HGNC
Ensembl ENSG00000102241 Ensembl
AllianceGenome HGNC:5276
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000218364.5 hg38 chrX 136,497,592 136,512,346 14,755
ENST00000535601.5 hg38 chrX 136,497,079 136,512,342 15,264
ENST00000535601.5 hg19 chrX 135,579,238 135,594,501 15,264
ENST00000218364.5 hg19 chrX 135,579,751 135,594,505 14,755
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