ENST00000538422.2 LRCH2

Information
Transcript ID
ENST00000538422.2
Genome
hg19
Position
chrX:114,345,189-114,468,635
Strand
-
CDS length
2,247
Amino acid length
749
Gene symbol
LRCH2
Gene type
protein-coding
Gene description
leucine rich repeats and calponin homology domain containing 2
Gene Entrez Gene ID
57631
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
20 114,345,189 114,347,898
19 114,357,090 114,357,167
18 114,357,323 114,357,460
17 114,357,643 114,357,755
16 114,358,508 114,358,565
15 114,364,718 114,364,762
14 114,384,390 114,384,506
13 114,384,585 114,384,633
12 114,391,165 114,391,230
11 114,398,239 114,398,346
10 114,399,968 114,400,026
9 114,400,121 114,400,218
8 114,400,404 114,400,515
7 114,400,818 114,400,905
6 114,404,862 114,404,995
5 114,413,990 114,414,126
4 114,414,209 114,414,314
3 114,418,974 114,419,100
2 114,422,789 114,422,933
1 114,468,256 114,468,635
CDS
Exon number Type Start Stop
20 CDS 114,347,779 114,347,898
19 CDS 114,357,090 114,357,167
18 CDS 114,357,323 114,357,460
17 CDS 114,357,643 114,357,755
16 CDS 114,358,508 114,358,565
15 CDS 114,364,718 114,364,762
14 CDS 114,384,390 114,384,506
13 CDS 114,384,585 114,384,633
12 CDS 114,391,165 114,391,230
11 CDS 114,398,239 114,398,346
10 CDS 114,399,968 114,400,026
9 CDS 114,400,121 114,400,218
8 CDS 114,400,404 114,400,515
7 CDS 114,400,818 114,400,905
6 CDS 114,404,862 114,404,995
5 CDS 114,413,990 114,414,126
4 CDS 114,414,209 114,414,314
3 CDS 114,418,974 114,419,100
2 CDS 114,422,789 114,422,933
1 CDS 114,468,256 114,468,604
Other genome
Genome Chromosome Start End Links
hg38 chrX 115,110,626 115,234,072 Link
CDS sequence
ATGGCGGCGAGTCAGGGAGGAGGCGGTAACAGTGGGGGCGGCGGTTGTGGTGGAGGTGGAAGTAGCGGTGGCTGTGGCACGGCTGGAGGGGGAGGTGGCGGGGCTGGAGGGGGAGGCGGCGGCGGCGGCGGGACCCTGGTGGTCCCCATCCCGGTACCGACTCTTTTCGGTCAGCCGTTCCCCAACGGGCCGCCGTGGAACCCGGGGAGCCTGCAGCCTCAGCACACCGTGAGGAGCCTGGACCGGGCCCTGGAAGAGGCGGGCAGCTCCGGCATCCTGAGCCTCAGTGGTCGGAAACTCCGAGACTTCCCGGGCAGCGGCTACGACCTGACGGACACCACCCAAGCAGATCTTTCCAGAAATCGTTTTACAGAAATTCCTTCTGATGTCTGGTTATTTGCACCCCTTGAAACATTAAATTTATATCATAATTGCATCAAAACCATTCCTGAAGCCATTAAAAATCTGCAGATGTTAACATACCTTAACATTAGCCGAAATCTTTTATCAACATTGCCAAAATACCTATTTGATCTTCCCCTTAAAGTTTTGGTCGTCAGTAATAATAAACTGGTATCCATTCCAGAAGAAATTGGGAAGTTAAAAGATTTAATGGAATTGGATATTAGCTGCAATGAGATTCAAGTCCTTCCCCAACAAATGGGAAAATTACATTCACTTAGAGAGCTAAATATAAGAAGAAATAATCTTCATGTTTTGCCAGATGAATTAGGAGACCTTCCCTTAGTCAAGCTGGATTTCTCTTGTAATAAAGTGACCGAAATTCCAGTTTGTTACAGAAAGCTGCATCATTTACAAGTAATAATTTTGGATAACAATCCATTGCAAGTACCACCAGCACAGATATGTTTAAAGGGTAAGGTGCACATATTTAAGTACTTAAATATTCAAGCATGTTGCAGAATGGATAAGAAACCAGATTCCCTGGATCTTCCATCATTGAGTAAACGAATGCCCTCACAGCCTCTCACAGACAGTATGGAAGATTTTTATCCAAATAAAAATCATGGCCCTGACTCTGGAATTGGAAGTGATAATGGAGAGAAACGATTATCCACAACAGAACCATCAGATGATGACACAGTCAGCCTTCATTCTCAAGTCTCAGAATCAAATAGAGAGCAGACATCAAGAAATGACAGTCACATAATAGGAAGTAAGACTGATTCTCAGAAAGACCAGGAGGTATATGATTTTGTTGACCCCAACACAGAAGATGTAGCAGTTCCTGAACAGGGAAATGCACATATTGGATCATTTGTATCATTCTTTAAGGGAAAAGAAAAATGTTCTGAAAAATCTCGGAAAAATGAAGAATTAGGAGATGAAAAAAGACTTGAGAAAGAACAGTTACTGGCAGAGGAAGAGGATGATGATTTGAAGGAAGTAACTGATTTGAGGAAAATAGCTGCTCAGTTATTGCAGCAAGAACAGAAGAACAGGATTCTTAATCATTCAACTTCTGTGATGAGAAACAAGCCAAAACAAACTGTGGAATGTGAAAAGAGTGTCTCAGCAGATGAAGTTAATTCACCATTATCACCCCTCACCTGGCAGCCCTTAGAAAATCAGAAGGATCAAATAGATGAACAACCGTGGCCAGAATCTCACCCTATAATCTGGCAGAGTGAAGAAAGGAGGCGGAGCAAACAGATTAGAAAAGAATATTTCAAGTATAAATCAATGAGGAAGAGTTCAAGTGGCAATGAAAATGATGAGGAATATGACAGAACTGATGGTTTTTCACACAGTCCCTTTGGCTTGAAGCCTAGATCAGCTTTTAGCCGCTCATCTCGCCAAGAATATGGGGCAGCAGATCCAGGATTTACAATGAGAAGAAAGATGGAACATTTACGGGAAGAGCGAGAGCAAATACGACAACTTCGCAACAATCTTGAATCCAGGTTAAAAGTAATTTTGCCTGATGACATTGGAGCTGCACTGATGGATGGGGTTGTTCTTTGCCATTTAGCCAATCATATAAGGCCACGTTCTGTTGCTAGTATTCATGTACCATCACCAGCAGTGCCCAAACTGAGCATGGCAAAATGTCGAAGAAATGTAGAAAATTTTCTTGATGCTTGTAAAAAGTTGGGTGTCTCACAGGAAAGACTTTGTTTGCCTCATCATATTTTGGAAGAACGAGGACTTGTGAAAGTTGGTGTCACAGTTCAGGCGCTCCTTGAATTACCAACAACCAAGGCATCTCAGCTTTCTGTGGCTTAA
Amino sequence
MAASQGGGGNSGGGGCGGGGSSGGCGTAGGGGGGAGGGGGGGGGTLVVPIPVPTLFGQPFPNGPPWNPGSLQPQHTVRSLDRALEEAGSSGILSLSGRKLRDFPGSGYDLTDTTQADLSRNRFTEIPSDVWLFAPLETLNLYHNCIKTIPEAIKNLQMLTYLNISRNLLSTLPKYLFDLPLKVLVVSNNKLVSIPEEIGKLKDLMELDISCNEIQVLPQQMGKLHSLRELNIRRNNLHVLPDELGDLPLVKLDFSCNKVTEIPVCYRKLHHLQVIILDNNPLQVPPAQICLKGKVHIFKYLNIQACCRMDKKPDSLDLPSLSKRMPSQPLTDSMEDFYPNKNHGPDSGIGSDNGEKRLSTTEPSDDDTVSLHSQVSESNREQTSRNDSHIIGSKTDSQKDQEVYDFVDPNTEDVAVPEQGNAHIGSFVSFFKGKEKCSEKSRKNEELGDEKRLEKEQLLAEEEDDDLKEVTDLRKIAAQLLQQEQKNRILNHSTSVMRNKPKQTVECEKSVSADEVNSPLSPLTWQPLENQKDQIDEQPWPESHPIIWQSEERRRSKQIRKEYFKYKSMRKSSSGNENDEEYDRTDGFSHSPFGLKPRSAFSRSSRQEYGAADPGFTMRRKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSVA*