ENST00000538422.2 LRCH2

Information
Transcript ID
ENST00000538422.2
Genome
hg38
Position
chrX:115,110,626-115,234,072
Strand
-
CDS length
2,247
Amino acid length
749
Gene symbol
LRCH2
Gene type
protein-coding
Gene description
leucine rich repeats and calponin homology domain containing 2
Gene Entrez Gene ID
57631
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
20 115,110,626 115,113,335
19 115,122,527 115,122,604
18 115,122,760 115,122,897
17 115,123,080 115,123,192
16 115,123,945 115,124,002
15 115,130,155 115,130,199
14 115,149,827 115,149,943
13 115,150,022 115,150,070
12 115,156,602 115,156,667
11 115,163,676 115,163,783
10 115,165,405 115,165,463
9 115,165,558 115,165,655
8 115,165,841 115,165,952
7 115,166,255 115,166,342
6 115,170,299 115,170,432
5 115,179,427 115,179,563
4 115,179,646 115,179,751
3 115,184,411 115,184,537
2 115,188,226 115,188,370
1 115,233,693 115,234,072
CDS
Exon number Type Start Stop
20 CDS 115,113,216 115,113,335
19 CDS 115,122,527 115,122,604
18 CDS 115,122,760 115,122,897
17 CDS 115,123,080 115,123,192
16 CDS 115,123,945 115,124,002
15 CDS 115,130,155 115,130,199
14 CDS 115,149,827 115,149,943
13 CDS 115,150,022 115,150,070
12 CDS 115,156,602 115,156,667
11 CDS 115,163,676 115,163,783
10 CDS 115,165,405 115,165,463
9 CDS 115,165,558 115,165,655
8 CDS 115,165,841 115,165,952
7 CDS 115,166,255 115,166,342
6 CDS 115,170,299 115,170,432
5 CDS 115,179,427 115,179,563
4 CDS 115,179,646 115,179,751
3 CDS 115,184,411 115,184,537
2 CDS 115,188,226 115,188,370
1 CDS 115,233,693 115,234,041
Other genome
Genome Chromosome Start End Links
hg19 chrX 114,345,189 114,468,635 Link
CDS sequence
ATGGCGGCGAGTCAGGGAGGAGGCGGTAACAGTGGGGGCGGCGGTTGTGGTGGAGGTGGAAGTAGCGGTGGCTGTGGCACGGCTGGAGGGGGAGGTGGCGGGGCTGGAGGGGGAGGCGGCGGCGGCGGCGGGACCCTGGTGGTCCCCATCCCGGTACCGACTCTTTTCGGTCAGCCGTTCCCCAACGGGCCGCCGTGGAACCCGGGGAGCCTGCAGCCTCAGCACACCGTGAGGAGCCTGGACCGGGCCCTGGAAGAGGCGGGCAGCTCCGGCATCCTGAGCCTCAGTGGTCGGAAACTCCGAGACTTCCCGGGCAGCGGCTACGACCTGACGGACACCACCCAAGCAGATCTTTCCAGAAATCGTTTTACAGAAATTCCTTCTGATGTCTGGTTATTTGCACCCCTTGAAACATTAAATTTATATCATAATTGCATCAAAACCATTCCTGAAGCCATTAAAAATCTGCAGATGTTAACATACCTTAACATTAGCCGAAATCTTTTATCAACATTGCCAAAATACCTATTTGATCTTCCCCTTAAAGTTTTGGTCGTCAGTAATAATAAACTGGTATCCATTCCAGAAGAAATTGGGAAGTTAAAAGATTTAATGGAATTGGATATTAGCTGCAATGAGATTCAAGTCCTTCCCCAACAAATGGGAAAATTACATTCACTTAGAGAGCTAAATATAAGAAGAAATAATCTTCATGTTTTGCCAGATGAATTAGGAGACCTTCCCTTAGTCAAGCTGGATTTCTCTTGTAATAAAGTGACCGAAATTCCAGTTTGTTACAGAAAGCTGCATCATTTACAAGTAATAATTTTGGATAACAATCCATTGCAAGTACCACCAGCACAGATATGTTTAAAGGGTAAGGTGCACATATTTAAGTACTTAAATATTCAAGCATGTTGCAGAATGGATAAGAAACCAGATTCCCTGGATCTTCCATCATTGAGTAAACGAATGCCCTCACAGCCTCTCACAGACAGTATGGAAGATTTTTATCCAAATAAAAATCATGGCCCTGACTCTGGAATTGGAAGTGATAATGGAGAGAAACGATTATCCACAACAGAACCATCAGATGATGACACAGTCAGCCTTCATTCTCAAGTCTCAGAATCAAATAGAGAGCAGACATCAAGAAATGACAGTCACATAATAGGAAGTAAGACTGATTCTCAGAAAGACCAGGAGGTATATGATTTTGTTGACCCCAACACAGAAGATGTAGCAGTTCCTGAACAGGGAAATGCACATATTGGATCATTTGTATCATTCTTTAAGGGAAAAGAAAAATGTTCTGAAAAATCTCGGAAAAATGAAGAATTAGGAGATGAAAAAAGACTTGAGAAAGAACAGTTACTGGCAGAGGAAGAGGATGATGATTTGAAGGAAGTAACTGATTTGAGGAAAATAGCTGCTCAGTTATTGCAGCAAGAACAGAAGAACAGGATTCTTAATCATTCAACTTCTGTGATGAGAAACAAGCCAAAACAAACTGTGGAATGTGAAAAGAGTGTCTCAGCAGATGAAGTTAATTCACCATTATCACCCCTCACCTGGCAGCCCTTAGAAAATCAGAAGGATCAAATAGATGAACAACCGTGGCCAGAATCTCACCCTATAATCTGGCAGAGTGAAGAAAGGAGGCGGAGCAAACAGATTAGAAAAGAATATTTCAAGTATAAATCAATGAGGAAGAGTTCAAGTGGCAATGAAAATGATGAGGAATATGACAGAACTGATGGTTTTTCACACAGTCCCTTTGGCTTGAAGCCTAGATCAGCTTTTAGCCGCTCATCTCGCCAAGAATATGGGGCAGCAGATCCAGGATTTACAATGAGAAGAAAGATGGAACATTTACGGGAAGAGCGAGAGCAAATACGACAACTTCGCAACAATCTTGAATCCAGGTTAAAAGTAATTTTGCCTGATGACATTGGAGCTGCACTGATGGATGGGGTTGTTCTTTGCCATTTAGCCAATCATATAAGGCCACGTTCTGTTGCTAGTATTCATGTACCATCACCAGCAGTGCCCAAACTGAGCATGGCAAAATGTCGAAGAAATGTAGAAAATTTTCTTGATGCTTGTAAAAAGTTGGGTGTCTCACAGGAAAGACTTTGTTTGCCTCATCATATTTTGGAAGAACGAGGACTTGTGAAAGTTGGTGTCACAGTTCAGGCGCTCCTTGAATTACCAACAACCAAGGCATCTCAGCTTTCTGTGGCTTAA
Amino sequence
MAASQGGGGNSGGGGCGGGGSSGGCGTAGGGGGGAGGGGGGGGGTLVVPIPVPTLFGQPFPNGPPWNPGSLQPQHTVRSLDRALEEAGSSGILSLSGRKLRDFPGSGYDLTDTTQADLSRNRFTEIPSDVWLFAPLETLNLYHNCIKTIPEAIKNLQMLTYLNISRNLLSTLPKYLFDLPLKVLVVSNNKLVSIPEEIGKLKDLMELDISCNEIQVLPQQMGKLHSLRELNIRRNNLHVLPDELGDLPLVKLDFSCNKVTEIPVCYRKLHHLQVIILDNNPLQVPPAQICLKGKVHIFKYLNIQACCRMDKKPDSLDLPSLSKRMPSQPLTDSMEDFYPNKNHGPDSGIGSDNGEKRLSTTEPSDDDTVSLHSQVSESNREQTSRNDSHIIGSKTDSQKDQEVYDFVDPNTEDVAVPEQGNAHIGSFVSFFKGKEKCSEKSRKNEELGDEKRLEKEQLLAEEEDDDLKEVTDLRKIAAQLLQQEQKNRILNHSTSVMRNKPKQTVECEKSVSADEVNSPLSPLTWQPLENQKDQIDEQPWPESHPIIWQSEERRRSKQIRKEYFKYKSMRKSSSGNENDEEYDRTDGFSHSPFGLKPRSAFSRSSRQEYGAADPGFTMRRKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQALLELPTTKASQLSVA*