ENST00000622259.4 SNX12
Information
- Transcript ID
- ENST00000622259.4
- Genome
- hg19
- Position
- chrX:70,276,182-70,288,298
- Strand
- -
- CDS length
- 519
- Amino acid length
- 173
- Gene symbol
- SNX12
- Gene type
- protein-coding
- Gene description
- sorting nexin 12
- Gene Entrez Gene ID
- 29934
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 70,276,182 | 70,276,219 |
| 5 | 70,278,474 | 70,278,477 |
| 4 | 70,280,878 | 70,280,968 |
| 3 | 70,281,693 | 70,281,817 |
| 2 | 70,282,704 | 70,282,799 |
| 1 | 70,287,992 | 70,288,298 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 70,276,182 | 70,276,219 |
| 5 | CDS | 70,278,474 | 70,278,477 |
| 4 | CDS | 70,280,878 | 70,280,968 |
| 3 | CDS | 70,281,693 | 70,281,817 |
| 2 | CDS | 70,282,704 | 70,282,799 |
| 1 | CDS | 70,287,992 | 70,288,156 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chrX | 71,056,332 | 71,068,448 | Link |
CDS sequence
ATGTCGGACACGGCAGTAGCTGATACCCGGCGCCTTAACTCGAAGCCGCAGGACCTGACCGACGCTTACGGGCCGCCAAGTAACTTCCTGGAGATCGACATCTTTAATCCTCAGACGGTGGGCGTGGGACGCGCGCGCTTCACCACCTATGAGGTTCGCATGCGGACAAACCTACCTATCTTCAAGCTAAAGGAGTCCTGCGTACGGCGGCGCTACAGTGACTTTGAGTGGCTGAAAAATGAGCTGGAGAGAGATAGCAAGATTGTAGTACCACCACTGCCTGGGAAAGCCTTGAAGCGGCAGCTCCCTTTCCGAGGAGATGAAGGGATCTTTGAGGAGTCTTTCATCGAAGAAAGGAGGCAGGGCCTCGAGCAGTTTATTAACAAAATTGCTGGGCACCCACTGGCTCAGAATGAACGCTGCCTACACATGTTCCTGCAAGAGGAGGCAATTGACAGGAACTACGTCCCGGGGAAGTCTTTCTCACAGTGTTGTCCAGGCTGGAGTGCAGTGGCGTGA
Amino sequence
MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKSFSQCCPGWSAVA*